Sequences from confirmation amplicon


Confirmation sequences for line SALK_065596c and hit At5g16790 are shown.
Line ID SALK_065596c
Locus At5g16790 [Araport] [TAIR] [MIPS] [SIGnAL]
Deduced position of insertion Chr5:5523660
Primers used for PCR 48sf - LBb3, show primer details
   
Sequence Name 45-K116586-SALK_065596C-48sf
GenBank Accession queueing for submission to ENA/GenBank
Sequencing primer gene specific primer, 48sf: 5'-AACCAGATCCTTCTTCAATTCTGA-3'
Sequence (A. th genome BLAST matches underlined)
>45-K116586-SALK_065596C-48sf
TAAACAGATTTAAAAAAAAAAAACCAACCCAAACCATTTTTTCGGGGTTATTAACAAATT
TTCATTTCCCCCCTGTGAAGGCTTAATTTGTAATTTAAAAAACAATGGGGATTGGGTTTT
TAATAAATGAAATTTACCGACCAACCTGTGAAAAACGAGGGAAAGGGGAAAAAGGACCGG
AACCTTAAAATTAGGGTTCCCAGTGCATCAAAAAACCAAAATTTCCCTGTTTCGGATTTT
TAACCGTACAAAAGGTGAATTGATTTTGGGTTCGGTTCGGTTCAAGTAATTTAAATTTTC
TCTTTTTCCCCAATTATTTTTGGGGTCAATCCCCCTATAATTTCGGTTCCCTGAAAATTT
GAAAAACAAAATTTTTCCTATACCGTTTTTGACAATAAAAAAAATAATTCAAATTCTATA
AAACTTTTGCTTAATTACAATTTCAAATGTTATAAATTCCCGTGAATGATTTTTCAAAAA
ACAATTTGACCCTTAAACAACTTAATAACCCTTTGCGAACTTTTTTAATGTACGGGGGTG
GTTTTTCTTTTCCCCATTGAAACGGGCAACAGCTGATTGCCCTTCCCCCCCGGGCCCTAA
AAAATTTGCACCAAGCGGTCCACCCTGGTTTCCCCCACCAGGCAAAAATCCTGTTTGATG
GGGGT
   
Sequence Name 28-K116585-SALK_065596C-R210
GenBank Accession LN485092 [GenBank]
Sequencing primer T-DNA primer, R210: 5'-CCCAGTACATTAAAAACGTCCGC-3'
Sequence (A. th genome BLAST matches underlined)
>28-K116585-SALK_065596C-R210
GGAATTCATCACATTCCGAACTCGTAATTAAGCAAAAGTTTCATAGAATTCGATTTATTC
TTCTCATCGTCAAAATCGTTATAGGACAACTTCTGTTTCTCAAATTTTTCAGTGAACCGA
AATTATAGTGAGATTGACCCAATAAATAATCGGCGAAAAAGAGAATATTTAACTTACTTG
AACCGAACCGAACCCAATATCAATTCACCTCTTGTACGATTAAAAATCCGAAACAGAGAA
ATTATGATTCTCTGATGCACTGTGAACCCTAATTCTATGTTTCCGTTCCTTCTTCCCCTT
TCCCTCGTTCTTCACAGTTTGCTCGTTAACTTTCATTTATTATATACCTAATCCCTATTG
TTTTTTAAATTACAATTTAAGCATTCACAGTGGTGAACTGAAATTTGTTACTAACCCAGA
AAATTGGTCTGGTTTGTTTTTTTTTTTTTAAATCTTTTTAAACATCTCTGGTTAATTCCA
TGTCAGGGGAATTACCCCCATTTAAACCCAAAACCTTTTCTTGATCAAAATTGAAGGGT

Last Updated on 06.12.2018 16:11