DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_029831c
Line Availability available from NASC (N672483) and ABRC (SALK_029831c)
Confirmed for Hit At2g35100
Parent of DUPLO pair none
Parent of pair(s) 6783

Gene hit At2g35100

 
Sequence (A. th genome BLAST matches underlined) 
TATCTTAACTTGCGACGATTCTCGCTACCTGAGTGATGTCATGTATACAAGTAAGACGGT
ATTTTGACTATGACAACCCAAATGGAGCAGTGAAGGAAATCTGGCGTCAAGTCTCCCACA
AGTTACCACTCATCAAACTAATGAGTAACCGTGACAGGCGCCTCGTCCTAAGAAATTTGA
CCGAACCAAACTGCTCATGTCTATGCACAAACCAAACCGGTCTTATCACTTCCATTTAAA
CAATCTCTTTGTCTTTTGGGAGAGACCTTTTGGACTGTGGAGGAGCTTGAGAAGGAGAGA
GTTCACCGAGACTTACACAAGCAGATATTCCCCCCTCCCGTGGCATAACTACTTCTCCGG
TAAGCAA
GenBank Accession ED578092 [GenBank]
Graphic View Graphic view of gene At2g35100
Predicted Position of Insertion Chr2:14794230 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T4C15
Hit Gene Code At2g35100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Exostosin family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g02440

 
Sequence (A. th genome BLAST matches underlined) 
GATTCTTTTCTTGGTTGAATCCTTACCTATCCCTGCACATTTTCATATTTTGTTCCATAT
TCGGATAGATCAATGAATTACTTTAACATTATCCATATTT
GenBank Accession BH758682 [GenBank]
Graphic View Graphic view of gene At5g02440
Predicted Position of Insertion Chr5:531483 - go to primer design
BLAST e Value 5e-41
Hit Clone Code (BAC ID) T1E22
Hit Gene Code At5g02440 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 60S ribosomal protein L36
Insertion Classification CDSi
Confirmation Status failed


Last Updated on Thursday, 10 June 2021 13:37