DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_049543c
Line Availability available from NASC (N685885) and ABRC (SALK_049543c)
Confirmed for Hit At3g12140
Parent of DUPLO pair 6781
Parent of pair(s) none

Gene hit At3g12140

 
Sequence (A. th genome BLAST matches underlined) 
CCTCATCTGCATTGTACTGGGTTATAATTGCTTCATAGAAGTGGTTATCTTCAGGCCATT
TTGTCCACACTTTTCTTCCGATCAGAGCTTCAGCAGATTCATTTCCTGATATGCCACTGG
ATACCAGACGATTATTGAATGACCTATTTCCAGTCGCACCAATTGATGGATTATACTGCA
TCTCACAGATAATTGGTTAAGAAATAACATAAAACAACACAATGTGGCTAACCAGAAGAA
AGTATTAAAGAACCATCATTGGTGCAAATACGGCTAGAATATAAGACTTACAGATGGAAA
TGTTTTCTGTTTCTTTCGGGCAGCTGAGAAAGTGGGACTAGGAAGAACATCAAAAGGCTG
AATAGTTGCATGTCTAGTAATTTGGCTTGCGCCTCCCTGTCTCCAATCTCTGGTACAGTT
CCATGATACAACATATATTNAAATAAACGAGATTCATGATAAATTTTGTTTATGCTGGTG
CAAATAAAC
GenBank Accession ED588850 [GenBank]
Graphic View Graphic view of gene At3g12140
Predicted Position of Insertion Chr3:3870179 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T21B14
Hit Gene Code At3g12140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on Thursday, 10 June 2021 13:37