DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_120188
Line Availability available from NASC (N620188) and ABRC (SALK_120188)
Parent of DUPLO pair 12458
Parent of pair(s) none

Gene hit At2g18000

 
Sequence (A. th genome BLAST matches underlined) 
CNCCATATCTAGCATGCGTCGCAGCCGCCTAGCGTGCGACTTCTACTCACCGACCGCAGC
GCAGGTGTGACGTATCACCAAGTAGTTCGACCATATAGCGTGAATAGTCCCCCTAAAGTG
GTTGATGCTCCTCCCTTTAGGTTGTCTGAGTGTGGTTGGGGAGAATTGCAGCCCAGCTCC
TGAACCAATGCTTGCTGTCGCGGTTGGATTCATGAGTTGCCTGAGGGTCCTCAATCTGCC
TAGTGGCGCCAATTATCGCCGGAGATGCGACACGTGTCCTCCTTTGCTACCCTCATTATG
ACCCTGCCCCGTTCTTTTCGGCTCGCCCATCGTTTACGTATTAAGCGTTTGGGTCGTCGA
TGGCGGTGGAGGAGTGAGCTCTAGACTTACCCATCATTCGCATGCGCAGGCCGAGCGCCC
AGAGGTTCCCCGTCCGATGTTTTCTTGCCGCCGTAGTGAAGACGACGCGTTCATGTGACG
CGCCTCTTTATCCTCCCCGCTCTTACCTAGAGGACACCTGTGCAGCAATCACGTCCGACC
CACTATCAACACATCTGTTTCTGCTGCCCTCCCATCGATATCCGACACA
GenBank Accession queueing for submission to ENA/GenBank
Graphic View Graphic view of gene At2g18000
Predicted Position of Insertion Chr2:7829659 - go to primer design
BLAST e Value 3e-13
Hit Clone Code (BAC ID) T27K22
Hit Gene Code At2g18000 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation TBP-associated factor 14
Insertion Classification CDSi
Confirmation Status failed

Gene hit At5g64710

 
Sequence (A. th genome BLAST matches underlined) 
GACACGCGTGTCGTATAGTGAGTCGTATTAACAAAACCGCCCCAGTACGTTAAAAACATC
CGCAGATGTCGTTATTATGGTGTGCGCTATAACAGTCAATTATGTTCTACTCGCACCAAT
ATATGCCTGCGACCGTATCAACTCATTCTCATGGATCTTTTTGGAGACTGGACCGACATC
TTCGAATGATGAATCATATTCACATGGAACCGGGGTTGACGAAGTAACAATGTGCCCTGA
TTCAATCCTAGCCTCGGGCATCATTTCTATCAAAGACTGCAGTTTCGAAAAACCGAATTT
ACGATATTCTAAACGGTATCCAAATTTCTCCAAAAAGGCTTTCTTGAATTTAGTTATGCT
ATAACCTCCAGCGTTTTCCTCTGTTATCTTCTTTATCAGCTTATGACAATCCGCAATTAC
CTTGCTTCTCGATCTTTCTTTAGGTTTCTGGCTCATACCAACGTTGGTGGAATTTTTATC
ACCATTTGCTCCCGTCCCCAGCGATTCTGAAATATTCACCAATATCGCTCTCAATCCCTC
CCGGGTGGGGAGGGTTGCTACAACAAGACCTTCCCA
GenBank Accession ED604550 [GenBank]
Graphic View Graphic view of gene At5g64710
Predicted Position of Insertion Chr5:25871853 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MUB3
Hit Gene Code At5g64710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Putative endonuclease or glycosyl hydrolase
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on Thursday, 10 June 2021 13:37