DUPLOdb - Line and FST details


Line specific information

 
Line ID SALK_121719
Line Availability available from NASC (N621719) and ABRC (SALK_121719)
Parent of DUPLO pair none
Parent of pair(s) 97317

Gene hit At1g45227

 
Sequence (A. th genome BLAST matches underlined) 
CCATAATGATTTTGTTTCAGCTTCTTTGACAGAAGTACTGGAACAAACGCATACACCAAA
GCTACAACAATGAATAGCGCAATAACATGGGAGCTTAGCTTAGCCATATTTTTTTGTATG
CTTGGAATTTATCGACTTATTCTTAGTGTATGAAAAGAATGTAATGGACTATGTTTTTAT
TTATTTGATATTCTAGACATGAAGCTATGTAAATTATTTATAGGTGAGTGAAAATCCAAC
GTAAGTGATATAAATATTAGAAAATTAGCTTCAGAAATAAATTA
GenBank Accession CC458703 [GenBank]
Graphic View Graphic view of gene At1g45227
Predicted Position of Insertion Chr1:17144860 - go to primer design
BLAST e Value 1e-129
Hit Clone Code (BAC ID) T2P3
Hit Gene Code At1g45227 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At4g10840

 
Sequence (A. th genome BLAST matches underlined) 
CCGACGGGGGGGCCTGTCAACAAAATAANAGTTATGCCAGAAGACTCTAGAAATTCACCA
GATCGCATATTGAACCTGCTTTCACTGGAGAAGCAGCCTGATAGAAAATTGATGGCCAAT
TATCTGCGAGGCTTAAAGAGATTNTGAAAACGCTCTTAAACCATCTTGTTCTTGCCAGTA
TGGCTATGATTGCGAGTGGACAAAAATCTGAGGGTTCATCGATTGATGTTAGTATTGGGA
ATATTTCCATGTCCCCTGTGCCGGCTTTGATGAAGCTGTGTTTTCATATCCGAGAGCTCT
TCTGGTTTTTAGGGCTTCCTAAGGAAAGATCCATCCAACGGTTGCTCCAATGTTTTGTTA
AATTGGCTGAGCTTTACCATAGAACAGGGAAACTT
GenBank Accession ED604834 [GenBank]
Graphic View Graphic view of gene At4g10840
Predicted Position of Insertion Chr4:6657457 - go to primer design
BLAST e Value 3e-83
Hit Clone Code (BAC ID) F25I24
Hit Gene Code At4g10840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Tetratricopeptide repeat (TPR)-like superfamily protein
Insertion Classification CDSi
Confirmation Status failed


Last Updated on Thursday, 10 June 2021 13:37