SimpleSearch - Line and FST details
Line specific information
| Line ID | 040B01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N403757) |
| Segregation Analysis | 50:47:34 |
| Confirmed for Hit | At5g46130 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 67816, 96794 |
Gene hit At5g46130
| Sequence (A. th genome BLAST matches underlined) | >02-K015218-022-040-B01-8409 CTGATCCATGTAGATTGTCCCGGACATGAAGCACTTTGATCGCGTTACTCCACTTTGATT CAATCCCATACTCATTGCCTCGCAGACTTCTCCAGCCAAAAACTTGCTCTTAATTATGAT TTCGTTTTCACCCTCTGATCCGGACCTCCTATGGGATCCTCCCTATAGTGAGAAGATNNN GGACAGTGTACGGGAGGCAGACGATGAGAGAGAGAGCTGGCAAAGGATAGGGATAATAAG GGGATGCTCGATAGGCAGAGAGACTTACGGTGGTATGGGATCCGAAACTACGCAAGGGCA TGAGTGCAGGAGCCGAGACTGACAGGTCAAGTACTGGAACAAAGAGCAAGAGAACTACGG TATAATTCCTGGAGGCGAGGGGATGAGCTCATGTGGTCTCAACTGCAAAGAGAAAGACGA GCCCACGGATCATAGGGATGACAAAAAAGATGTGCCTCAGTATATGTTGTAGGAGGTGGA GGAGATGAATTCGTTTACCAGGACAGACCA |
| GenBank Accession | AL763749 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:18704009 - go to primer design |
| BLAST e Value | 4e-50 |
| Hit Clone Code (BAC ID) | MCL19 |
| Hit Gene Code | At5g46130 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | hypothetical protein (DUF295) |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | AL763750 [GenBank] AL763749 [GenBank] |
| Line 040B01 has other hits detected, show all hits of this line |
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Last Updated on 10.06.2021 13:37 |
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