SimpleSearch - Line and FST details
Line specific information
| Line ID | 146E10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N413978) |
| Segregation Analysis | 100:54:52 |
| Confirmed for Hit | At2g47020 At5g48100 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At2g47020
| Sequence (A. th genome BLAST matches underlined) | >77-K013026-022-146-E10-35St TTGCGTAAGGGATGACGCACAATCCCCTATCCTTCGCAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTATCAGTGTTTAACTGACTGACCTGCGGAGATGAGAATTCAGTATATCACAC AGTATGTTCTCAGCAAACATCGTCATCGTGGTCCGTTTGGACTAATGATTGCACCATTCC CACGAACATGCAACTCCCTTGCTTGGTCACACGAAACTTTCGAGCTTACGAAGACAGAAA CGTCGGATTCATCTAACTCTATGGGAGCCTCCCTATAGAGAGTCATTTTACCCAGAGGCT CCCCTGGCACGGGAGAAACATTGATGCCATATTAGCCTGGGGAAGGATAGCCACTGATAT AGCGCTCTGGGATCCTCCCTATAGAGAGTCCATTTACTTTCATTGGAATAGGGCTGAGAT TATGCGAAAATATACACTCATATACATAAATACTGACAGTGTGAGCTACCAATTCAGTGT AGCCCATGACCTTACATAGGTCACTCAAATGCTATGGGATCCTCCCTATAGTGAGTCG |
| GenBank Accession | FR804361 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:19320616 - go to primer design |
| BLAST e Value | 0.002 |
| Hit Clone Code (BAC ID) | F14M4 |
| Hit Gene Code | At2g47020 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Peptide chain release factor 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | FR804361 [GenBank] |
Gene hit At5g48100
| Sequence (A. th genome BLAST matches underlined) | >77-K013026-022-146-E10-35St TTGCGTAAGGGATGACGCACAATCCCCTATCCTTCGCAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTATCAGTGTTTAACTGACTGACCTGCGGAGATGAGAATTCAGTATATCACAC AGTATGTTCTCAGCAAACATCGTCATCGTGGTCCGTTTGGACTAATGATTGCACCATTCC CACGAACATGCAACTCCCTTGCTTGGTCACACGAAACTTTCGAGCTTACGAAGACAGAAA CGTCGGATTCATCTAACTCTATGGGAGCCTCCCTATAGAGAGTCATTTTACCCAGAGGCT CCCCTGGCACGGGAGAAACATTGATGCCATATTAGCCTGGGGAAGGATAGCCACTGATAT AGCGCTCTGGGATCCTCCCTATAGAGAGTCCATTTACTTTCATTGGAATAGGGCTGAGAT TATGCGAAAATATACACTCATATACATAAATACTGACAGTGTGAGCTACCAATTCAGTGT AGCCCATGACCTTACATAGGTCACTCAAATGCTATGGGATCCTCCCTATAGTGAGTCG |
| GenBank Accession | FR804361 [GenBank] |
| Graphic View |
|
| Predicted Position of Insertion | Chr5:19492702 - go to primer design |
| BLAST e Value | 4e-07 |
| Hit Clone Code (BAC ID) | MDN11 |
| Hit Gene Code | At5g48100 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Laccase/Diphenol oxidase family protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |