SimpleSearch - Line and FST details
Line specific information
| Line ID | 082G09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N407857) |
| Segregation Analysis | 50:49:39 |
| Confirmed for Hit | At3g19080 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At3g19080
| Sequence (A. th genome BLAST matches underlined) | >71-011866-strizhov-G9-35St CTGACGTAAGGGATNGACGCACAATCCCCTATCCTTCGCAAGACCCTTCCTCTATATAAG GAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTATGGTGGAT GTGCTAATTCTGTCACCCCAGTAAACGCCTGAAGCTCTGGCGAGAGGCTGCAAACTTTAG CAAAGCCGCCTCCTCCTTTTCTCTTGGGCTTCTCTACCGACTTGGCTGGCCTATTTAATA GAGAAAACTTAGTTTATGGGCACAGGGTGGCGATAACTATGGGATCCTCCCTATAGTGAG TCGANTTACTC |
| GenBank Accession | BX001107 [GenBank] |
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| Predicted Position of Insertion | Chr3:6597745 - go to primer design |
| BLAST e Value | 2e-83 |
| Hit Clone Code (BAC ID) | K13E13 |
| Hit Gene Code | At3g19080 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | SWIB complex BAF60b domain-containing protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g57020
| Sequence (A. th genome BLAST matches underlined) | >71-011867-strizhov-G9-8409 TTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATAATTAAACTCA GTTTCAGTAAACCATGGGAGAAGTAGTTCAGACTGAAGAAAAAAAAAGAGAGACAAATTT CAAGTTTGTTGATACCATCAAATCAAGTTGTTGAGCTTATAAAAAAACAAGCCCGAGTTC CGCTGGCTTCAAGGCACTTTTCAAACGGTAATTGTAAAGATAGTAATGAAGTTGTCCATC TCCTGGCCCAAACTTCAGTTCTTTCAAGAAACTCTCATTGTGCATCACATCCAACGCGTT GAACACATCGAAACCCTTTTGCTTTGAAACAATTAGCGCATCATTCATCAGCTGAAAAAA CGAGGTCTGTGTGGCCACATTGTAGTAAGAATACGCAGCTTTCAATGTAGTGTAGTTCGG GTTACCGAGGATGGTTGAAGGGAGAGTGTAAAACCTGCAAAAGTCAGTGACATCGTGAGT TTCAGGGCTTTCTACTATGGGATCCTCCCTATAGTGAGTCGAT |
| GenBank Accession | AL769032 [GenBank] |
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| Predicted Position of Insertion | Chr5:23076864 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | MHM17 |
| Hit Gene Code | At5g57020 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | myristoyl-CoA:protein N-myristoyltransferase |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |