SimpleSearch - Line and FST details


Line specific information

 
Line ID 013E06
Vector Used pAC106
Line Availability available as T3 set from NASC (N401206)
Segregation Analysis 50:48:47
Confirmed for Hit At4g31340
Parent of DUPLO pair 2416
Parent of pair(s) none

Gene hit At4g31340

 
Sequence (A. th genome BLAST matches underlined)
>54-K011967-0022-016-E06-8409
CCTAGACATTGTCTTTCTGCCGACTTCCAGATTCCAGGCTCCGCTAATTTCCCACACAAT
GAAAATCTAATGCTATAATAGCATCAGAGAAAGTTATATGTTAAACTGTGTCAAACTAAT
ACCTCTATGGGATCCTCCCTATAGTGAGTCGTATTACTCACNNNGCTNCGGGCCCCTCCC
CCCGGGGNGTCGCCTCGCCCGGCGGCGGGCCCTCCGTCCCCCTCCCCCCCGCGCCCCCCC
CCCGGGNGGTTCCTCTTGCTCCCTGCCCCCTGCCCTCCCGGGGTTCTCTTCTGGCTCTCG
GTTCGCGCCCGTTTGTCTTCTGGCCTCTCCCCTGCTCCTGGATTGTTTTTACCCGCCGCC
CCCCCCGGCGCCCGTCCCCTCCCTTCTTTTTTGCGCCTCCCTTCTTCCTTGCCTTCTTCT
CCCGGCCCGGGGTTCGCGTTGGCTCGCACCTCCTTCGCCTTTTTTTTTCGGCGGGCCCTT
CGCCGTTTGCTCCGCTGCGCCCCCCTCTCTTTTGTGTGTGGTCCTTTCCCCCCCCCCCGG
GGCCCTCCTCCTGCCCACCCCCCTCTCCCGCCCCCGCTCTCCCCTCCCGGGCCCGCGCCG
CGTGCCTTCCCTTCCGCGTGCTTCCCCTCCCTTCCTCCTCTCTTCCCCCTCCTCCCCTCC
TCCTTCTTCTCTCCCCCGTTCCCTCTTGCGTCCCCCCCTGTCTTTCCTCCCTCCCCCCCC
CTCNTCCCCCCCCGCCTCCTCCGCCTTTTTCCTCCCCCGCCCCCTCCGCCGCGTCCCTCC
CCCTCCGACCCACCGCGTGCCTCCCTCCCTCTCCCNCTCTCNTCCCGCCCCCGCACCCTA
AATATAAAAAGAAAAACAAA
GenBank Accession AL752647 [GenBank]
Graphic View Graphic view of gene At4g31340
Predicted Position of Insertion Chr4:15207597 - go to primer design
BLAST e Value 7e-49
Hit Clone Code (BAC ID) F8F16
Hit Gene Code At4g31340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation myosin heavy chain-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR800269 [GenBank] AL752647 [GenBank]

 
Line 013E06 has other hits detected, show all hits of this line


Last Updated on 10.06.2021 13:37