DUPLOdb - Line and FST details
Line specific information
Line ID | SALK_050760 |
Line Availability | available from NASC (N550760) and ABRC (SALK_050760) |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At2g21660
Sequence (A. th genome BLAST matches underlined) | TCACTGGGTTACATTAACACACCTCGAGTGCGGTATCCCGTGTACTAAGGCCGTCGAGCC CTCTTGCGCTATGTAGAGTCGTAATACTCCCCATTTAGCTCTATAGTGTGCACGTGATAT GTCCCCAACCACTACAACTTTTAGCTGCAGATCGGGCCGTGGACAAACCATAATTGAAAC CGGAAATNTGGTGAAAAACACCGCCAAGAGGCAGGAAGCCCCGGCATACTCAGGTCGACG CTAATTGCCGCGAGAACCAGAGGACTCTGACTTATATTAGGGGGTGGTTGGGGAAAGCGC GCGGTGCACGCTGCGGGGCTGTGCCGCTCTAAAACATGGCGTGATCCGGCCT |
GenBank Accession | queueing for submission to ENA/GenBank |
Graphic View | |
Predicted Position of Insertion | Chr2:9266532 - go to primer design |
BLAST e Value | 9e-06 |
Hit Clone Code (BAC ID) | F2G1 |
Hit Gene Code | At2g21660 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | cold, circadian rhythm, and rna binding 2 |
Insertion Classification | TS2TE (5') |
Confirmation Status | unknown |
Gene hit At5g22900
Sequence (A. th genome BLAST matches underlined) | GGTTATACAACAACAACAGCTAATGATTTACGTTCTTATATACGTACATAATCATTTTGC AATTTTACCATATCTTTTCATTATAGACTTACAAATTTAATTGTAAGAAGAATATTTTTT TTGTAAATTTTATTTAGACCATTCAAATGTAACTTTTTGGAAAATCCACTTAGCCGATCA GTTCATCACAAATATAACCGCATAAGGTTTTGCGATCAACAACTATTTTAA |
GenBank Accession | BH908851 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:7659838 - go to primer design |
BLAST e Value | 1e-99 |
Hit Clone Code (BAC ID) | MRN17 |
Hit Gene Code | At5g22900 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | cation/H exchanger 3 |
Insertion Classification | CDSi |
Confirmation Status | failed |
Last Updated on Thursday, 10 June 2021 13:37 |