SimpleSearch - Line and FST details


Line specific information

 
Line ID 031F08
Vector Used pAC106
Line Availability available as T3 set from NASC (N402948)
Segregation Analysis 50:35:28
Confirmed for Hit At3g28350 At1g66910
Parent of DUPLO pair none
Parent of pair(s) 97107, 97113, 97117

Gene hit At3g28350

 
Sequence (A. th genome BLAST matches underlined) 
>86-K014871-022-031-F11-8409
NTTTGGATCCATGTAGCATTTCCCGGACATGAAGCACTTTACAATCTGAACTATACCATA
TGTCGACATGCCATGGAATTACTGGAAACAAATGCATTAATGTTTTTATGGTATTGGTCA
GCATGATGTATCCGTGTTCAGATATCTCTCTACCTGTACAAAAAACTATTTGCTGTACCA
AAACCAATGAACCCTAACCGAAATCTCAAGAGTTAAGAAATATAGAAAGCATCAATCACA
TATAGACCTACCAGATTTCTCTTAGACAGGTTGAAGCAGCTATGGGATCCTC
GenBank Accession AL763017 [GenBank]
Graphic View Graphic view of gene At3g28350
Predicted Position of Insertion Chr3:10610190 - go to primer design
BLAST e Value 4e-121
Hit Clone Code (BAC ID) MFJ20
Hit Gene Code At3g28350 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g66910

 
Sequence (A. th genome BLAST matches underlined) 
>86-K014862-022-031-F11-8409
TTGATCCATGTAGATTNTCCCGGACATTGAAGCCTTTACATTGATTTCTCGTCAGATAAT
AATTTCTTCTATCATCAGTCCCATCATCTGGACAATCAAGCTCTTTAACAAAAGTAGAAA
CAAACGATGAAACGTTTCGGTTGCAGTCGTAATAAATGGTTAGCAGGTCGGTGGTAGAAG
CAAGTGGAAGGACGGTTTCGTTGAATGACGTAGTGAAGGAATTTGGGAGACACGGATCGT
CGATATTATCGGATCTGGCGAGTGTTATGATACCAGAGTCATAATCCGCACCTATGGGAT
C
GenBank Accession AL763016 [GenBank]
Graphic View Graphic view of gene At1g66910
Predicted Position of Insertion Chr1:24963430 - go to primer design
BLAST e Value 5e-139
Hit Clone Code (BAC ID) T4O24
Hit Gene Code At1g66910 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR800909 [GenBank] FR800909 [GenBank]


Last Updated on 10.06.2021 13:37