SimpleSearch - Line and FST details


Line specific information

 
Line ID 031G02
Vector Used pAC106
Line Availability available as T3 set from NASC (N402954)
Segregation Analysis 50:45:45
Confirmed for Hit At1g35710 At3g53570
Parent of DUPLO pair 2642
Parent of pair(s) none

Gene hit At1g35710

 
Sequence (A. th genome BLAST matches underlined) 
>15-K113048-0022-031-G02-8409
TAACTTTCATTTTATAATAACGCTGCGGACATCTACATTTTTGAATTGAAAAAAAATTGG
TAATTACTCTTTCTTTTTCTCCATATTGACCATCATACTCATTGCTGATCCATGTAGATT
TCCCGGACATGAAGCCATTTACAATTGAGTATAAACCGCTACCTATCCGGGAGAGTTCCT
ATTGCTTCTGGAGGTTCACCAAAGAGGTTGTTGGTAGATAGATCCAGCTCAACTAACCTG
CCCGGCC
GenBank Accession FR800920 [GenBank]
Graphic View Graphic view of gene At1g35710
Predicted Position of Insertion Chr1:13222999 - go to primer design
BLAST e Value 2e-21
Hit Clone Code (BAC ID) F14D7
Hit Gene Code At1g35710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation kinase family with leucine-rich repeat domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL763020 [GenBank] FR800920 [GenBank]

Gene hit At3g53570

 
Sequence (A. th genome BLAST matches underlined) 
>15-K014871-022-031-G02-8409
AAAAGCAATGGGAGACTCCCTTAAGTGAGATCCTTTATGCAAAGCAGTGTGTATCGTGAT
AAAGCTATGGGATCCTCC
GenBank Accession AL763021 [GenBank]
Graphic View Graphic view of gene At3g53570
Predicted Position of Insertion Chr3:19864360 - go to primer design
BLAST e Value 2e-12
Hit Clone Code (BAC ID) F4P12
Hit Gene Code At3g53570 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation serine/threonine-protein kinase AFC1
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37