SimpleSearch - Line and FST details
Line specific information
| Line ID | 039A05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N403653) |
| Segregation Analysis | 100:33:22 |
| Confirmed for Hit | At1g76550 |
| Parent of DUPLO pair | 12560 |
| Parent of pair(s) | none |
Gene hit At1g76550
| Sequence (A. th genome BLAST matches underlined) | >33-K015216-022-039-A05-8409 AACCTGTTTCTTAATGAATGGAGGCACAAACTCAAACAAAGCAGATGACCAAGATGACAC CTGAGTAGAAATATTATTAACCTGCACACCCTCCTTAAGCAATCCATGAATTTCCTGCAT CGCACAACAACATGTAAATGCTTACTATGCTTTGGAACTCATGTTTTATTAAAAAATAGC ACATTAAATGATAAATAAAAATGTTTGCCAGTATTGAATCGCTACCTTCAACAGAGCATA GAGTTCACGAATACTCTCAACAAGCCCTTCAGGAATTACGATGACTCCATGATTTTTGTC TGATACAAATAGACAGTTTATCAATAAAGTTAGGGAACAAGCAAAAGACATCACTTCCAA CATACCAAAAGCTTGTTTTACTTATCAGACCTTGTTCGGCTCTTGCTTGAACAGCATCAC AGATTTGTTTTATGATGTCAAATCTTGCGAGCTTAGATGCTGCACCCTCCTCACCCCAGT ATCATCTGAGACAATCGCATCAAATGCAAATGATAAACTA |
| GenBank Accession | AL763657 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:28724136 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F14G6 |
| Hit Gene Code | At1g76550 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Phosphofructokinase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | AL763657 [GenBank] |
Gene hit At5g47090
| Sequence (A. th genome BLAST matches underlined) | >33-K030268-022-039-A05-8409 CCGGAATGAAGCCATTTACATTGAATATGTCCAGGAAGATTAAACCGAGGGCGGGAAACA AGAATCTGAATACCCGGAATATGCGATCCTCAGCTAGGTCGATCCGTCTGAATGGTAAAG AACAGAAAGAGAAGGCAACAACAGTCTTACCGCCAGAGGAGATGCAAGATATGATGGATC AGTTCACATCAATCATGGAACAGAAGTTCTTATCGGGAGAAGATCATCAACATTTGGATT ACGCAAAGATAGACAATGACGAGACTCTTGATGATCATTGGCTTCGAGAGATTGGCCGTG ACGCTGAAGATAAGTATGGGATCCTCCCTATAGTGAGTCANATTGCGCACCCCCCCTAAT TAGGGGTAGAATGGTCTCCCTATAGGGAGGATCCCGTTCCCCAGCGTTAT |
| GenBank Accession | CR934252 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:19128200 - go to primer design |
| BLAST e Value | 6e-116 |
| Hit Clone Code (BAC ID) | K14A3 |
| Hit Gene Code | At5g47090 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | coiled-coil protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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