SimpleSearch - Line and FST details


Line specific information

 
Line ID 040D01
Vector Used pAC161
Line Availability available as T3 set from NASC (N403781)
Segregation Analysis 50:33:22
Confirmed for Hit At5g16320
Parent of DUPLO pair none
Parent of pair(s) 310
Note

Gene hit At1g66130

 
Sequence (A. th genome BLAST matches underlined) 
>04-K030269-022-040-D01-8409
TCCCGGAATGAGCCATTTACAATTGAATACTCATTTGAAGCCATCTTAACCGTCCGTTGA
TGATGCAACCAAATCGTATGGGATCCTCCCTATAGTGAGTCGTATTACTCACGTTCTTT
GenBank Accession CR934392 [GenBank]
Graphic View Graphic view of gene At1g66130
Predicted Position of Insertion Chr1:24615464 - go to primer design
BLAST e Value 2e-11
Hit Clone Code (BAC ID) F15E12
Hit Gene Code At1g66130 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAD(P)-binding Rossmann-fold superfamily protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 014H04
Other FSTs Supporting this Hit CR934392 [GenBank]

Gene hit At5g16320

 
Sequence (A. th genome BLAST matches underlined) 
>29-011515-rosso-d1-35St
TTGCGTAAGGGATGACGCACAATCCCCTATCCTTCGCAAGACCCTTCCTCTATATAAGGA
AGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTC
GGTTTAAACTATCAGTGTTTGATAATGATTTCTCCTTTCACCGTCTTTCTCACTTTCCTG
GTCTGAGATCTATACTCACTGTTCCTCACTCCAATCCTCCCTTGCTATGGGATCTATACT
TCTGGACTGAAAATCTACTTTGGAACATGATTCGTATAGAATCGACGCTTCTGATGCAGG
GAAATCGTCGTCTTCGGAGGAGGTATCGGAGCAACCCGTTGTTGAGCCGGAGTTGAGAGC
CTTGTGTGAGAAGATCGACGGAATTGGTTTGATTAAGTATTTGATTAGGATATGGGATCT
ATACTTTCGGGTTGAGAATCGAGT
GenBank Accession AL763768 [GenBank]
Graphic View Graphic view of gene At5g16320
Predicted Position of Insertion Chr5:5344605 - go to primer design
BLAST e Value 1e-99
Hit Clone Code (BAC ID) MQK4
Hit Gene Code At5g16320 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation FRIGIDA like 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL763768 [GenBank]


Last Updated on 10.06.2021 13:37