SimpleSearch - Line and FST details
Line specific information
| Line ID | 053G05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N405069) |
| Segregation Analysis | 50:49:39 |
| Confirmed for Hit | At3g27650 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At3g27650
| Sequence (A. th genome BLAST matches underlined) | >49-K104196-0022-053-G05C-8409 TTCGGACTGAGCCATTTACATTGAATATATCCTGTATTGATGATGATACCATTTTATTGC TACTTTGCTAGTTACCAAATTCAAAATGGAAATAAAACATTTGAAACTGTATCAATTTTT AAAAAGTGTACGTAGACATATTGTTGATAAGATATTGATAATTGATGTATATAGAAGAAG AAGAGACTCCAGAGAATTACAATATCGATCGATATGGATCAAAATTCATATCAATCTTAT ACTGTAGTTTCGAGAATTACTAATAAGATACTATGATGTGATTAAATCGTTTTTGCCATT TTTTTGCAACTGAAAAATCAGGGGATATATATGTCGAACTACACAAACTCACCGTGTGCA GCATGCAAATTCCTCCGGCGTAAATGCACGTCAGACTGCGTATTCGCACCCTATTTTCCG CCGGAGGAACCTACAAAGTTTGCGAACGTCCACCGGATATTCGGGGCAAGCAATGTGAGC AAGATCCTCCACGAAGTGGCTCCCCATCAGCGGGAAGATGCGGTCAACTCGCTGGCTTAC GAGGCGGAAGCACGACTTAAAGATCCAGTGTATGGCTGCGTTGGAGCGATCTCGGTGCTC CAAAGACAGGTCTTGAGGTTGCAAAGGGAACTCGAGGAGACAAATGCT |
| GenBank Accession | HG968657 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:10239662 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | MGF10 |
| Hit Gene Code | At3g27650 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | LOB domain-containing protein 25 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | AL754218 [GenBank] AL754218 [GenBank] |
Gene hit MNC6
| Sequence (A. th genome BLAST matches underlined) | >39-K012298-022-053-G05-35St TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGAAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTATCAGTGTAAATGGCTTCATGTCCGGGAAATCTACATGGATCAGCAATGAG TATGATGGTCAATATGGAGAAAAAGAAAGAGTAATTACCAATTTTTTTTCAATTCAAAAA TGTAGATGTCCGCAGCGTTATTATAAAATGAAAGTACATTTTGATAAAACGACAAATTAC GATCCGTCGTATTTATAGGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATCTTTAT TTCGACGTGTCTACATTCACGTACAAATGGGGGCTCCCATGACAAACTCCACGATCGACG CCTTGATTTCGCCATTCCTAGATACCCATTTCATCCCACCACGGCCCTGAAACCATGCAC ACACACCCACCCCACTCCTCAATACTGCCACCCCCGCGCCCCCCACTCCCCACGGCCCCC TAACATTACATAATTCACTCACCCCCATAACCGACCCCTCCCTTTCGTGAGTCCCCTTCT TCCCCCCCCCACCCACGTCCAACACCCCCCCCACCCCACCCCCGCACCACCCCCACACCA CCGGACCACCGCCCGACCCCCCCGCCCCCACCGGAAGGGCCCCCCCCCACACTCCCCACC AACCCCACCCCCCACACACAGGCCCCACCCCAACCGGACACTCCAACTCGCCCTCTCCCC CTTTATATTACAGAGTCTCTCCTCCTCTCACATTAACACTCTCGAACCAGATCATTACGT ATCTTACCGATGCCACAAAATGCTATCTTGCGCCGCTCTTCCACGCGCCCCCCTCCCGCC CCGCCGCGCGCCACCACTAAAACAAAACGCCCAATCAACACACTCCACCAAACCCCTCCC A |
| GenBank Accession | FR801710 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:21768086 - go to primer design |
| BLAST e Value | 0.38 |
| Hit Clone Code (BAC ID) | MNC6 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
