SimpleSearch - Line and FST details
Line specific information
| Line ID | 061E12 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N405820) |
| Segregation Analysis | 100:100:93 |
| Confirmed for Hit | At2g43290 |
| Parent of DUPLO pair | 2698 |
| Parent of pair(s) | 62 |
Gene hit At2g43290
| Sequence (A. th genome BLAST matches underlined) | >93-K016089-022-061-E12-8409 AGAACTCACCACCGTCTCCGTCAACGATGTTACCTTCTCCATCATCTTCTTCAGCGCCGA CGAAAAGAATAGATCCGTCCGAGCTCAAACGCGTTTTCCAGATGTTCGACAAGAACGGTG ACGGTCGAATCACAAAGGAAGAGCTCAACGACTCGCTTGAGAATCTTGGAATCTACATAC CAGACAAAGATCTGACTCAAATGATCCACAAGATCGATGCTAACGGGGATGGATGCGTCA ACATAGACGAGTTTGAGCCGCTGTACAGCCTCGATTGTGGATGAGCCATCCCACGATGGC GGAACCGAAGGAAAAGGATATGAAAGATGCGTTTACCGGGTTTGACCAAACGGAAATGGG TTTATCCCTGTGGGAGAAGTGGAATCTGTGATGGCTTCCTTGGGACTCCAGCAGGGAAGA CCCT |
| GenBank Accession | BX890734 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:17992244 - go to primer design |
| BLAST e Value | 2e-175 |
| Hit Clone Code (BAC ID) | F14B2 |
| Hit Gene Code | At2g43290 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Calcium-binding EF-hand family protein |
| Insertion Classification | Promoter |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit F15L12
| Sequence (A. th genome BLAST matches underlined) | >93-K016088-022-061-E12-8409 ATACATTTAGATTTATTACTATCACCTTTGAAATCTTAACGCAAGTCGTATATGGACTTT ACTAATTGCATGATGCATCCAATAACTATTACTATCTGTACATAACTTGCTACGCTCATG ATCTCACCATGATTTAATATAATTGTGAAACTTTTCTAATTGAATAACACGATATTATCT TATGATTATCATTCCTTTGGGTCGCGGCGTGTTTGTTTGCTCACTACCGCTTATGGAAAA GAAAATCATGGTTTTGTTTCTCTTAATGTGAATCGCTATGGGATCTCCCTAAGTAGTGAT GCGATGGGATCCTCGCCTATATTGAGGAGTATACANACGTGTGGCGCGCTCCCATGTGGA CGCAAATATTTCTCTTCGTGATTGA |
| GenBank Accession | AL936859 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:24276714 - go to primer design |
| BLAST e Value | 2e-46 |
| Hit Clone Code (BAC ID) | F15L12 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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