SimpleSearch - Line and FST details


Line specific information

 
Line ID 066F10
Vector Used pAC161
Line Availability available as T3 set from NASC (N406310)
Segregation Analysis 100:91:65
Confirmed for Hit At3g20840
Parent of DUPLO pair 2549
Parent of pair(s) none

Gene hit At3g20840

 
Sequence (A. th genome BLAST matches underlined) 
>78-011694-strizhov-F10-oriL
NTTTTGGATCCATGTAGTATTTCCCGGACATGAAGCCATTTACAATTGAATATAACCCTG
CCGACGTCTTACGATATGGCCTGCATAAAGTATAGAGGACTTATTGCCGTGACCAATTTC
TAGATCAGCACGCGGTCCACTTGAAAGCCATTCTATGGAATCCTCCCTATGGTGAGGTCT
GTTACTCGCCCGGGGATCTTACTGTTTACACTCTGCACTCTTAACCTTAATTCTTGAAGA
GCGCGTACTAATATTAACATCCTTTGACTGAGGTATTCCGGTACCCCGCCCAGACGCCAT
TTATGAGCGGACAGTTACTCGAAACAGGCCCACTCAAGCCGTCGGTGCCGGCGGCGCGCC
CCGACTCAAGGTTGCCCTCTTCCCTGCAGGTCGTTGCCTGTACTCTGGCCATACAGTAAA
GCGCAGGCCAGGCGGGCGACAAGAATGTAAGCTACTTACAAAACTACTCAGGGGGATATC
TCCCCTTTCTTATCTTGTAATTCCTCAATACCATGAAGCACCGCTCCACAATGCACTACT
TTTCCTGTGATTTGACCAATATATAAGTTGCCAGATTACAAAAGGTGCAATCTATTGGAC
AACGCCTCATGGGAAAACCAAAACATAACCTTTTAATGCCAGCCACGAACTCTTTGCTCG
CGTGCGCTTCATTTCCTCTACTTTTTTC
GenBank Accession FR802134 [GenBank]
Graphic View Graphic view of gene At3g20840
Predicted Position of Insertion Chr3:7302141 - go to primer design
BLAST e Value 1e-28
Hit Clone Code (BAC ID) MOE17
Hit Gene Code At3g20840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Integrase-type DNA-binding superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37