SimpleSearch - Line and FST details


Line specific information

 
Line ID 083D05
Vector Used pAC161
Line Availability available as T3 set from NASC (N407913)
Segregation Analysis 50:13:7
Confirmed for Hit At1g75000
Parent of DUPLO pair 11734
Parent of pair(s) none

Gene hit At1g75000

 
Sequence (A. th genome BLAST matches underlined) 
>36-011868-strizhov-D5-8409
TTGATCCATGTAGATCTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGGAATC
TCTACATTATAACATGATTTATTATACGCCATTTTTATGACTTGAATGTTGAATATACGC
CTATTCGATTTATTGTTAAAAATCATACTTCAGCTAAAATATGAAAACTGGAGATCAGAT
TTATTCTGTTGATGTTGTTGTTGTATGATAATTAGGAATAGGAATCATTGTAGTCTTGCT
CTCCGACACAAAATATATTATATAATTTTGCATTATAATAGCTTATTTTGATCTTTTGAA
GATTCCTCACTTTTCTCAGGTTGCAAGGAAAGAAAAAGTCAGGTAGCTTTCGGTATTGAA
TTCGTTTCTTTTAAACATCTAATCAAAGAAAAGGAGTTTTTAAGTCACAGGAATACTTTT
TATGAATCACGTTTTGCCATAATAATAACCTGAGAAAAGACAAAATCGATATGCCCTATA
TAGTTACAGCATTGCCGGATGATATCAATCTCCGGCGTCCACTTGTTTCCGGTCAATGAG
AACACCGTCGTCCCAAGTTTCAAAGTATCTGTAAGAAAAACCCCCCCAACAATTTTTAAA
TAACCTTGGGGTTGCTCCTTTTTCTGATTAAGAAGGGGAAAAGTTTTTTTTTAAAAACCC
TGGACCTTGCTCCATCCAAATTCTATCCCAAGGAATTGGCCCGGGCCGCCAACACTCTTT
GAAAAGCCCAAAAAAATCTCCACGGAACTTTTAATAGAACCGGCCCTTCCCCATGGGGTT
TTCCTTTCCAAAAAATTGCCAA
GenBank Accession AL769078 [GenBank]
Graphic View Graphic view of gene At1g75000
Predicted Position of Insertion Chr1:28164548 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F25A4
Hit Gene Code At1g75000 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GNS1/SUR4 membrane protein family
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37