SimpleSearch - Line and FST details


Line specific information

 
Line ID 086A07
Vector Used pAC161
Line Availability available as T3 set from NASC (N408167)
Segregation Analysis 100:97:89
Confirmed for Hit At5g57800
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At5g57800

Sequence (A. th genome BLAST matches underlined)
>49-K012541-022-086-A07-35St
TGACGTAAGGGATGACGCACAATCCACTATCCTTCGAAGACCCTTCCTCTATATAAGGAA
GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG
GTTTAAACTATCAGATTGTCAAAGCACTTGTTCATGAACTATGGAGCGTTTTCAACAACA
TGCTTTTCGTGACTCGTACTCTAAGGATTAACCCTAAAGGGATCGACTTTAAACAGATTG
ATCACGAATGGCACTGGTAAAATCTCCAATCTCATTGACCCATTTCAAAATAATTCATTA
AAGTTTTATCATTTTCCTTTAGTCCTCTGTTTTTCCTCTGTTTTTCCTTTTATTTTTGCT
GTTCTTGAAACATACTCAGAAAGAGAGAAAGGTGTATTATATAAGGAGCGAGAAAGTAGG
TGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL769426 [GenBank]
Graphic View Graphic view of gene At5g57800
Predicted Position of Insertion Chr5:23420839 - go to primer design
BLAST e Value 3e-88
Hit Clone Code (BAC ID) MTI20
Hit Gene Code At5g57800 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Fatty acid hydroxylase superfamily
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details