SimpleSearch - Line and FST details


Line specific information

 
Line ID 106F01
Vector Used pAC161
Line Availability available as T3 set from NASC (N410141)
Segregation Analysis 102:95:77
Confirmed for Hit At5g40390
Parent of DUPLO pair none
Parent of pair(s) 2741

Gene hit At5g40390

 
Sequence (A. th genome BLAST matches underlined) 
>06-K012378-022-106-F01-8409
NTGATCCATGTAGATTTCCCGGACATGAAGCACTTTACAATTGCGTCGAGGTTAAACCCG
ATGAATGAACCGGCAGAGACGTCGAGTGGTACACCGTCTTTGTCGACTAAGTAAGGTGAA
GAGGTGAGAGTAACGTTAACCGGAACATCGGTTAAGACGACTTGACCTTTGGCTAAGAGA
GTGGAATCTTCTAACCGGAATTTTTCGGTAAAGTCAACGCCATTGATACCGGAATCGGAC
TTGGTCAAACACGGCGAAGCCATTTTGCCGATATGCAAGATTTTGGACAAAGGATTGAGA
ATGTTTTTTAGGTTAAGATGGTAGAGAGTAATTTATAGAGTTTATGAAACTTAAAAACTT
TCCCGAATTTGATTATATGATAAGATTATGGATTGAAAGAAAGATAGGAAATGTCATTAG
ATACTTATAGAATTATTGGTCGACATGTAAGGAATGAGTAAGAGAGTGAAACCTATACTT
TCTTCGTTTTTGTTAATTGAATTACTTCTTTATATATTATGATATATTTGTGGGGCTGTT
TGATTTGCTACCTTTAGATTTGGCCGTTGGTGATTTAATACGAAGGGGAAATAGATTTTG
TATACATGGTTCTA
GenBank Accession BX572174 [GenBank]
Graphic View Graphic view of gene At5g40390
Predicted Position of Insertion Chr5:16161939 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MPO12
Hit Gene Code At5g40390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Raffinose synthase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37