SimpleSearch - Line and FST details


Line specific information

 
Line ID 106H05
Vector Used pAC161
Line Availability available as T3 set from NASC (N410169)
Segregation Analysis 50:48:33
Confirmed for Hit At1g03080
Parent of DUPLO pair none
Parent of pair(s) 25

Gene hit At1g03080

 
Sequence (A. th genome BLAST matches underlined) 
>40-K012499-022-106-H05-35St
TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGCAGACCCTTCCTCTATATAAGGAA
GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG
GTTTAAACTATCAGTGTTTGCAATGTCTGCAGATTTTAACTTATCACCAAGCTCTCTTAC
CTCTTCCTCAAGCTTACACTTGACAATACTGAGTCTGTCTATGGGATCCTCCCTATAGTG
AGTCGTTTTCACTCAGNTNTGAAGACGCGGGCGGAACGTCTTCTTTTTCCACGATGCTAC
TTGTGGGTGGGGGTCCTNCATGGAGATATCATCTTCTAATTTACATTTCTCCTCCTCCAA
CTGCAATGTTGACTTTGTCAAGTATGCTTTCTCATCCAACGTTTTGTTATTATCTCCCTG
TAGAATGGTGTAGTCATCTCGTAACTGCAACACCTGCCTGTGAAAATCCTCAATTTCCAC
CATCAAAACCTTTTCTCTGTTGACTCCTTGATTAACTTTTGTGGTCAATTCTCCGTTCAC
GAAGATAAGTTTCTGGGTCTCATCCCGCGAAAACGAGAGCTGCTGACACTGAGATTGAAG
GTCTTCCTCAAGGATTGGCGTCTCTGTTGCAAAACCTACAGCTTCTGATGTAAGGTGGCG
AAAAAATTCATAAGGGCCAGGGTCTCTATGGCAGAGAGCTGGGTTTTATCCCGAAGGCTC
AAAAGCATAAGTTGCATG
GenBank Accession AL756216 [GenBank]
Graphic View Graphic view of gene At1g03080
Predicted Position of Insertion Chr1:733665 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F10O3
Hit Gene Code At1g03080 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation kinase interacting (KIP1-like) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR803138 [GenBank]


Last Updated on 10.06.2021 13:37