SimpleSearch - Line and FST details


Line specific information

 
Line ID 107E05
Vector Used pAC161
Line Availability available as T3 set from NASC (N410229)
Segregation Analysis 50:49:42
Confirmed for Hit At5g50950
Parent of DUPLO pair 11978
Parent of pair(s) none

Gene hit At5g50950

Sequence (A. th genome BLAST matches underlined)
>37-K012377-022-107-E05-8409
CTCTTGATCCATGTAGATCTCCCGGTACATGAGAGCATTTACAATTGAATCTTCCTCGAT
ATACTCATTGCTCGTTTTAATTATCTATGGGATCCTCCCTATAAGGGAACTGATTACTAA
ACGATACTGCTGTCTCAAACTAGTGTGGTAATCTATGAACGACCTATAAACTTAGCACTC
CTGGCCTGGAGGAGTAAAAAACTTCGGGGATTACCTATCCGTAGACCGTNCTATACACAA
ACACATGCTATGTAGTAAAACTGAAAGTTGGTGAACACTATAACTATGGGAGCCTACCTA
TCAGGAGAATCCTTAGGGTCACACACGTGGTGAAAAAATTGTGCACCCAGATGACCATGT
GAACAGATCACATTCTTCTAATGACACTTTTCCAACTGTAAGCTTTAGTTGGCATTCTCA
TTAGTCATTACCAATAATTTTGCATGCTTAACGTTCATTCAATTGCTTACGGTGTTCGTG
TAACCGATTGCTTTTATTTCCTATATGTATGCTCACTGCTCTGTCAAGTACTACTTGACG
GGCGTATAATTTTGGGTATTCGAAAAGGGCATGCACATTGCAACTGCAACCGAGATTACT
TCGAGGCTAATCCCTAAGGGATCCT
GenBank Accession AL756270 [GenBank]
Graphic View Graphic view of gene At5g50950
Predicted Position of Insertion Chr5:20730681 - go to primer design
BLAST e Value 5e-136
Hit Clone Code (BAC ID) K3K7
Hit Gene Code At5g50950 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation FUMARASE 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details