SimpleSearch - Line and FST details


Line specific information

 
Line ID 117C02
Vector Used pAC161
Line Availability available as T3 set from NASC (N411162)
Segregation Analysis 50:50:34
Confirmed for Hit At1g69380
Parent of DUPLO pair none
Parent of pair(s) 1871

Gene hit At1g69380

 
Sequence (A. th genome BLAST matches underlined) 
>11-K012820-022-117-C02-35St
GATGGCCGTAAGGGATGACGCACTATCCCACTATCCTTCGCAAGACCCTTCCTCTATATA
AGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGC
CTTCGGTTTAAACTATCAGTGTAAAAAACTCAAAAACATGATTACAGTTAATGATAACAA
AATCAACCTATGGGATCCTCCCTATAGTGAGTCGTATTACTCANGNNNNGNNNCNGGNNN
NGANCGCNNGGGCANCCTCTGGGACCCTTCGTAGGGGGAGGCCTATACCTCGACCTATAG
GGAGGATCCCTAGGAGCGCATTTGCTATCTTAACTGCACTCATGCTCCAGAGTCCCTTAC
ACGATAAGCTAAACCGAAGCGGGGAACACAATCTGATCCCGGGCTACCTGTCTCGTCAAT
GAAACGAACCTTCTTATATAGAGGAAAGGGTCTTGGAATTATACCTGGCGATTGGGCCCT
CCTTACGTACGTGGAACATTCACATCAATCCCTTGATATGAAAACATGCGTTGCACGATA
TTCCTTTTTCCCGTCGCTCCTCGGGCGTGGGG
GenBank Accession AL757072 [GenBank]
Graphic View Graphic view of gene At1g69380
Predicted Position of Insertion Chr1:26081891 - go to primer design
BLAST e Value 3e-20
Hit Clone Code (BAC ID) F23O10
Hit Gene Code At1g69380 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation sporulation protein (DUF155)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL757072 [GenBank]


Last Updated on 10.06.2021 13:37