SimpleSearch - Line and FST details
Line specific information
| Line ID | 123D08 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N411756) |
| Segregation Analysis | 50:14:12 |
| Confirmed for Hit | At3g45090 |
| Parent of DUPLO pair | 2758 |
| Parent of pair(s) | none |
Gene hit At3g45090
| Sequence (A. th genome BLAST matches underlined) | >60-K012921-022-123-D08-35St TTACTGACGTAAGGGATGACGCACAATCCACTATCCTTCGAAGACCCTTCCTCTATATAA GGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCC TTCGGTTTAAACTATCAGTGTTTAATTGAATATTCAATTGAATATAATTAAACATATCAG TGTTTAAAGCCTTCGGTTTAATTGAATATCAGAGTAATTAAATTGTATATTTAACTGACC ATATTAATTTCTCTCGCCAATTACACTATGGGATCCTTCCTATGGTGAGTATTTTTACTC ATGCGGGCTCTAAGGGATCCTACATATAGAAACGTCATCTTCTTATTCCGCCTGTCGGGA AACATGGGTCATTCATAGATGACCAAATTTTGGCTAACCAGACTGATTCAGAACTCTAAA GTGCCCCGTGACCTGTTTGCCTGAGGTGTTCTGGTATTTGATACTTTCCGCTATTGATGT TTTGGGTTTCCCACTCCTAGAGACCCATTGGTTCTCAAAACCTGTGGTGCGATAAAACAA AAAGTGCA |
| GenBank Accession | FR803504 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:16491015 - go to primer design |
| BLAST e Value | 6e-40 |
| Hit Clone Code (BAC ID) | F14D17 |
| Hit Gene Code | At3g45090 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T4B21
| Sequence (A. th genome BLAST matches underlined) | >60-K012812-022-123-D08-8409 NTTTTGATCCATGTAGATCTTCCCGGGACATGAAGCCTTTACAATTGAATATATCCGGAC TGCCTATATGTAAATGATATAACTATGTTTTGCCTTACTACCTAATTAGCTATGGCTGTA TATACTGCAACGATATACCAATCGTTTGGTGGCACTAATATCAAAGCCTGCATACTCTTA ATTCTCGATCTAAATGATCACAATTATGATGCTTGGAGAGAGACTTTTCCATACACGCTG TCTGACGTTCGACGTTCTATGGGAATCTCCCTATAGGGAGTCTCCGTACTAACGGTCTTG ACATGTACTTTTCGCTCTATGGGATCCTGACCTATTATGAGTATANAAACATCAGAGATA TTGTTTCCTCAACAACTCATATATTTATTAGAAATTCATCACAAATTCTTCGCTCTCTGG ATGTGTACGTATGTATTTTTCCATACCTACCAAACTTGAGATCCCATCTTGATCAGCTAA AATTTGTGGTTTTGATTGGTCGATATCCCAAATGAAAATATCCATTAGTAGGTATGTAAA AGATAGCTATGGGATCCTCCCTATAGTGAGTCGT |
| GenBank Accession | AL764240 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:2448447 - go to primer design |
| BLAST e Value | 5e-102 |
| Hit Clone Code (BAC ID) | T4B21 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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