SimpleSearch - Line and FST details
Line specific information
| Line ID | 132B04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N412592) |
| Segregation Analysis | 50:14:13 |
| Confirmed for Hit | At5g13650 |
| Parent of DUPLO pair | 12562 |
| Parent of pair(s) | none |
| Note |
Gene hit At4g04200
| Sequence (A. th genome BLAST matches underlined) | >26-K013051-022-132-B04-35St NTATTGACGTAAGGGATGACGCATCAATCCCCTATCCTTCGCAAGACCCTTCCTCTATAT AAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCG CCTTCGGTCTTGGTGTTTGGCATTTGAGCTATAGCAGGTGCTACCTCTCCCTTTCACTCC ACTCATTCTAAACCAACTTTTTCTCAATGTGTTACTTGATTCGTCGATATCTTGATTATT CGGGGGTTGGAAGTTCGTGTAACTCTAGCAGAAGAACAATTCTAAGTGGTTACAAAACAG AAGGACATCAAAATATAGTTCTATGGGATCCTCCCTATAGTGAGTCAGTTTAACTTAAAA ACTTCATTCTTGATTTAAAAGGATCTANGTGAAGATCCTTTTTGATAATCTCACGACCAA ACTCCCTTAACGTGAGTGTTCGTACCACTGAGCGTCAGACCCCGGAGAAAAGATAAAAGG ATCTTCTTGAGATCGTTTAGAATAGCGCGAAATCTGCAGCTTGCAAACAAAAAACCACCG CTACCAGCGGCGGGTTTGTATGCCGGATCAAGAGCTACCAACTCTCTTTCCAAAGGGAAC TGGCTTCATCTGAGCGCAAAACCAAACACTGT |
| GenBank Accession | AL764872 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr4:2028039 - go to primer design |
| BLAST e Value | 1e-65 |
| Hit Clone Code (BAC ID) | T27D20 |
| Hit Gene Code | At4g04200 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Microsomal signal peptidase 25 kDa subunit (SPC25) |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
Gene hit At5g13650
| Sequence (A. th genome BLAST matches underlined) | >26-K012720-022-132-B04-8409 GAGACAAGCTTCTCCTCTGCTTCACAAGCAGCAAGTGCTCGGCGTCAGCTTTGCTTCCGC GCTCAAACCTGGAGGAGGAGCTCTTCGATTTCCTTCCCGCCGTCCGCTTCCTCGTCCCAT CACTTGCTCCGCCTCTCCATCAACTGCCGAACCAGCCTCCGGTTATTTTTTACTCTCTCT TATCTCTTCCGATAGTTTTATTACTGGAAATTGATTTCGTTTTTGTCGAGTTAAGTCAGT TTGAAATAAGAAAACTAGTCAATCAAAGCTCTAAGAATTATCACACGTAGGTTAGTTTCA ATATATATATGTACTTTTGGTGGTTGATTGGTTCTCTAAATAAAATCACTCTTGTTATGT TATGCCAGTAGAGGTGAAGAAGAAGCAGTTGGATACGAGGGATAACGTGAGGAATATCGC AATCGTTGCACATGTTGATCATGGCAAAACTACCTTGGTTGATTCTATGCTTAAGCAAGC CAAGGGAACACCTTAAACGCATATAATGGCCTTGGGCAACTCGAGAAAGTTTTTCTTAAC CCATGCCTTTACTTTGCGGGTTTCCGAGAATACCAAGTCATGCCAAGAGAGATCATGGCC TCAAAAGACCT |
| GenBank Accession | AL764871 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:4397759 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T6I14 |
| Hit Gene Code | At5g13650 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | elongation factor family protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
