SimpleSearch - Line and FST details


Line specific information

 
Line ID 134C07
Vector Used pAC161
Line Availability available as T3 set from NASC (N412799)
Segregation Analysis 50:12:11
Confirmed for Hit At5g61200 At2g38530
Parent of DUPLO pair 12008
Parent of pair(s) none

Gene hit At5g61200

 
Sequence (A. th genome BLAST matches underlined) 
>51-K012718-022-134-C07-8409
TTGATCCATGTAGACTTTCCCGGACATGAAGCACTTTACAATCTTCTTATTATTGACCCG
GACTGAACTGTGACCGTGCAGATGGACTTCTCTATGGGATCCTCCCTATAGAGAGACGTA
TGACTCATAGTTTCTGTGCTCTCCAGTTCTTGCAACAACAATAGCTGCTCAGATTTCGAC
GAACACAACTCCTCCCTCAAATAGTTAACTTCTTCTTCCAATTTCCCTGATTTAGTTACT
CTGACTTCAAGATCGAGTACATGTTCACTCAGGTCGTTCATTTCCTGGCTTCTGAAGTTT
ACTTGATCCCGCAAATAATCTGAAAGACAAAGAAAGTGTTTTTTAGCTCATATAAAATAT
ATGCCTATGGGATCCTCCCTATAGTGAGTCGTTTAACTC
GenBank Accession AL765037 [GenBank]
Graphic View Graphic view of gene At5g61200
Predicted Position of Insertion Chr5:24621257 - go to primer design
BLAST e Value 2e-132
Hit Clone Code (BAC ID) MAF19
Hit Gene Code At5g61200 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation myosin heavy chain-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g38530

 
Sequence (A. th genome BLAST matches underlined) 
>51-K104608-0022-134-C07-8409
AGCCATTTAAATCTTCTTTCCTTGACCCGGATCTCACACTGCCCGTGCAGCTGGACTTCC
TATGGGATCCTCCCTATAGTGAGACGTATTGCTCCCAGGGCAACGGAACCCTCGTGAGAC
TGAGACCTAGNGNTCCTCGGGNTTCCAA
GenBank Accession FR803931 [GenBank]
Graphic View Graphic view of gene At2g38530
Predicted Position of Insertion Chr2:16128736 - go to primer design
BLAST e Value 2e-06
Hit Clone Code (BAC ID) T6A23
Hit Gene Code At2g38530 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation lipid transfer protein 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37