SimpleSearch - Line and FST details
Line specific information
| Line ID | 139A12 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N413260) |
| Segregation Analysis | 100:98:72 |
| Confirmed for Hit | At3g23810 |
| Parent of DUPLO pair | 1213 |
| Parent of pair(s) | none |
Gene hit At3g16020
| Sequence (A. th genome BLAST matches underlined) | >89-K012875-022-139-A12-8409 NTTTTGATCCATGTAGCATTTCCTCGGACATGAAGCATTTACAATTGAATATATCCTGGT TGACTTCTCGTTCCAGAGCTCAAGCTGTGCAATCACCTGGTTGGTGAATGAGCACGACAT CACGAAACTCGGGTGTCCAGTGGCGCATCCCAAGTTCATCAAACGACCTTCAGCTATGGG ATCCTCCCTATAGTGAGTCGTATTACTCAACNNGNNNNTNGNCNCTNNTCNNNTNNNNAC TNTNCTTTAACAANGAAATCGCCTGATTATCACCCTTCTCTTCTAACTGCTGATGAATAT ACTGGAGTAATGCGATTCTTAGTAAAGCTCTCATTTTTAGATAAAGTGTTCCACTTTCTG CAAGTAGATCGCAATGCTCTCGATGATGTCACCGGAACCCTATGGGATCCTCCGTATAGA GAGTCGGATTACTCAATAAGAGCCTGAAGAGCACAGATTGGATCAATCTCAGGCGCTATG ACACGAGCACCCGGGGTTTTTATTGGCTGCAACTCGCCTATATACTACNTCGCCGTGCCC GCCGAGGACAGGCACCCTTTCAGCCATCGTAACATCAGTAGCCCTCATGAGACC |
| GenBank Accession | AL765427 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:5438562 - go to primer design |
| BLAST e Value | 2e-70 |
| Hit Clone Code (BAC ID) | MSL1 |
| Hit Gene Code | At3g16020 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | F-box associated ubiquitination effector protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
Gene hit At3g23810
| Sequence (A. th genome BLAST matches underlined) | >89-K012875-022-139-A12-8409 NTTTTGATCCATGTAGCATTTCCTCGGACATGAAGCATTTACAATTGAATATATCCTGGT TGACTTCTCGTTCCAGAGCTCAAGCTGTGCAATCACCTGGTTGGTGAATGAGCACGACAT CACGAAACTCGGGTGTCCAGTGGCGCATCCCAAGTTCATCAAACGACCTTCAGCTATGGG ATCCTCCCTATAGTGAGTCGTATTACTCAACNNGNNNNTNGNCNCTNNTCNNNTNNNNAC TNTNCTTTAACAANGAAATCGCCTGATTATCACCCTTCTCTTCTAACTGCTGATGAATAT ACTGGAGTAATGCGATTCTTAGTAAAGCTCTCATTTTTAGATAAAGTGTTCCACTTTCTG CAAGTAGATCGCAATGCTCTCGATGATGTCACCGGAACCCTATGGGATCCTCCGTATAGA GAGTCGGATTACTCAATAAGAGCCTGAAGAGCACAGATTGGATCAATCTCAGGCGCTATG ACACGAGCACCCGGGGTTTTTATTGGCTGCAACTCGCCTATATACTACNTCGCCGTGCCC GCCGAGGACAGGCACCCTTTCAGCCATCGTAACATCAGTAGCCCTCATGAGACC |
| GenBank Accession | AL765427 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:8588185 - go to primer design |
| BLAST e Value | 1e-59 |
| Hit Clone Code (BAC ID) | MYM9 |
| Hit Gene Code | At3g23810 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | S-adenosyl-l-homocysteine (SAH) hydrolase 2 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |