SimpleSearch - Line and FST details


Line specific information

 
Line ID 143D07
Vector Used pAC161
Line Availability available as T3 set from NASC (N413675)
Segregation Analysis 100:68:52
Confirmed for Hit At1g16780
Parent of DUPLO pair 2436
Parent of pair(s) none

Gene hit At1g16780

 
Sequence (A. th genome BLAST matches underlined) 
>45-K028351-022-143-D07C-8409
ATGTAGACACGTCGAAATAAAGATTTCCGAATTAGAATAATTTGTTTATTGCTTTCGCCT
ATAAATACGACGGATCGTAATTTGTCGTTTTATCAAAATGTACTTTCATTTTATAATAAC
GCTGCGGACATCTACATTTTTGAATTGAAAAAAAATTGGTAATTACTCTTTCTTTTTCTC
CATATTGACCATCATACTCAAATGTACCTCTTTTGTGGTATTCACGGACACTTTCTGGCT
GCAAGACACGATAAGTTTTATAGAAGCTTGAAAATTCAAAGATACAACATAGGCATAATT
CGAACCACTCATGACTCATACCTGCTGGCTCATCTCAACAATCCCACCTGCATTATCAGC
TATGGGACCAAACATGTCCATTGTAAGAACATAAGCTGCAGTGCTCAACATTCCCATTGT
AGCTACAGCTGTTCCAAATAGACCTCCAGTGGGGTTTCCCTTTTCATCTATTAGTCCCGA
GGTATTGCCCAGCCAAAAAGCAGAAATGATAGCTACACTTATAACCAAAACAGGAAGAGC
CGTGGATTCCAGACCCAAGCTGACCCCAGCAATTATATTGGTTCCATGACCAGTGGAGCT
AGCAAGAGCCAACGTCCGAACAGGCTCATACTTATAGTCAGTATA
GenBank Accession HG968763 [GenBank]
Graphic View Graphic view of gene At1g16780
Predicted Position of Insertion Chr1:5740589 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F17F16
Hit Gene Code At1g16780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Inorganic H pyrophosphatase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit HG968763 [GenBank]


Last Updated on 10.06.2021 13:37