SimpleSearch - Line and FST details


Line specific information

 
Line ID 144H10
Vector Used pAC161
Line Availability available as T3 set from NASC (N413822)
Segregation Analysis 50:28:26
Confirmed for Hit At5g42000
Parent of DUPLO pair 4
Parent of pair(s) none

Gene hit At5g42000

 
Sequence (A. th genome BLAST matches underlined) 
>80-K012978-022-144-H10-8409
TTGATCCATGTAGATTTCCCGGACATGAANGCCTTTTACGGTGAGATATTGGCGATTACG
TGTAAGCTGCTTGCCATTATCATTCTGTTCCCACCAAGTCAATCTATTATAGACTCCTTG
ATGCATCTCCAAATGGTGTTCCCTTCTTCCAACTGGAAGGAATGATACGTGACCTATGGG
ATCCTCCCTATAGTGAGTCTATCGACTCAGAGATACATTGCAATTCGGGAGGGCACCTAC
TTGGTCCTCATGGCAGCGATGATAACGTGAGACCCGGTCATACAGAGATGCTATGGAAAC
CTACTTACCAGGCAGCCGGAACGGCCGAGCGCAGAAGTGGTCCTGCAACTGTATCCGCCT
CCATCCAGTCTATTAATTGTTGCCGGGAAGCTATGGGATCCTCCCTATAGAGAGTCGTAT
TACTC
GenBank Accession FR804238 [GenBank]
Graphic View Graphic view of gene At5g42000
Predicted Position of Insertion Chr5:16799846 - go to primer design
BLAST e Value 5e-56
Hit Clone Code (BAC ID) MJC20
Hit Gene Code At5g42000 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ORMDL family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37