SimpleSearch - Line and FST details


Line specific information

 
Line ID 145A02
Vector Used pAC161
Line Availability available as T3 set from NASC (N413826)
Segregation Analysis 50:49:47
Confirmed for Hit At5g23730
Parent of DUPLO pair 12113
Parent of pair(s) none

Gene hit At5g23730

 
Sequence (A. th genome BLAST matches underlined) 
>09-K012979-022-145-A02-8409
TTGATCCATGTAGATTTCCCTGACATGAAGCACTTTACAATTGAATATATCCTGAAACAA
AAAAATTACGTGGCTCGAAGTAAATTTTGCTCATCTATGGGATCCTCCCTATAGTGAGTC
GTATTACTCAACCATCCTGACGCCCGACCGGGATCTCCTCCGGAGACTACTAAGCATCGC
CGGCAATACAGAAGTAATCTTCCCAGGACAGCGGCTAGACCGACGAAAGAAACTGCGGTA
CCGGAGACAGCGTTGTGACTTAAAAGAGAACGGCGGCCGTACAATCGAATCTTGCCTGAA
ATCCCGGCGGTAGGGACGATGTTATACTTGGGATCGAAATCAATAGCTCCGATATCGTCG
GAGGCCGAGGACGAGGGGGAAGATACTACAGGGGATAGAGAAAGAGCCCATTCGTCTCTA
TGGGATCCTGCCTAGAAGGAGTGGACTGACTTACCCGGAGCATTAGCCTCATGCCAAAGG
ACGTCCTAAACAAGCCTCCGGCAACCCCCCACCCTCCCACAAGGAGCACACACCGAGCCC
GCTCCCCGCACCCCAGAGTCAACCATACCGGCCGGCTCCGCCGGCCTGGACCGACCCAGC
CGAGCAATCCCCCATTTGGTTGCGGGACTTCAGCCGCCTACCGACCCCCGCCGGCGGCCG
TAAACACACCGCCGGTGGGAGGTGGCGGCGCACCCCTTAATCCAGACC
GenBank Accession AL765922 [GenBank]
Graphic View Graphic view of gene At5g23730
Predicted Position of Insertion Chr5:8005704 - go to primer design
BLAST e Value 1e-56
Hit Clone Code (BAC ID) MQM1
Hit Gene Code At5g23730 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Transducin/WD40 repeat-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37