SimpleSearch - Line and FST details


Line specific information

 
Line ID 150C10
Vector Used pAC161
Line Availability available as T3 set from NASC (N414338)
Segregation Analysis 50:13:10
Confirmed for Hit At5g40540
Parent of DUPLO pair none
Parent of pair(s) 2242, 2485, 83503, 83504

Gene hit At5g40540

 
Sequence (A. th genome BLAST matches underlined) 
>11-K118808-0022-150-C10C-8409
TGATCCATGTATCTAATCTCCANTACATATTGCTACATANATTTGGTTAGAGACAAACAC
CAAAACNGTTTTGATTTGGTATGTTTTGTAGTTCATTGGAGCTTGCAAAGAACCAATCAT
GGTTATAGTCACCGAGCTTTTACTCGGTGGTACATTGCGTAAATACCTTGTTAGCTTGCG
TCCAGGGAGTTTGGACATACGTGTAGCTGTTGGATATGCCCTTGACATTGCTCGGGCGAT
GGAATGCTTACACTCTCATGGAGTCATCC
GenBank Accession HG968782 [GenBank]
Graphic View Graphic view of gene At5g40540
Predicted Position of Insertion Chr5:16238335 - go to primer design
BLAST e Value 2e-138
Hit Clone Code (BAC ID) MNF13
Hit Gene Code At5g40540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL757566 [GenBank]


Last Updated on 10.06.2021 13:37