SimpleSearch - Line and FST details


Line specific information

 
Line ID 150E08
Vector Used pAC161
Line Availability available as T3 set from NASC (N414360)
Segregation Analysis 100:94:60
Confirmed for Hit At5g11720
Parent of DUPLO pair none
Parent of pair(s) 523, 90547

Gene hit At3g06365

 
Sequence (A. th genome BLAST matches underlined) 
>61-K028794-022-150-E08-8409
TGAACCTTTTACATGGAGATCGAAGGATCNANNGCAACGTCGCTATGACCGTCTGGCTGC
CNCAAGCCAGTTATCCCTGTGGTAACTTTTCTGAGACCTCTAACTTCAAATTCCGAAGGT
CTAAAGGATCGATAGGCCACGCTTTCACGGATCGTATTCGTATGGGAACCTCCCTATAAG
GAGAGGGAAACGGATATACGCATATGGGGAGAAGGTGGTACAATAGGGAGAGCGAGATAG
GACGAGGCGAATGGAATGATAACAGTAGGGGTAAGTGGGAGCACATATGAGAGTGATGTA
AGAGATGATGGTGAATAGGTAGGGCAGAATCTAGGTCGAGTCATGGGGGAAGTTAGTATG
AAAAAAGTTGGGCGGGGATAGGATAAGGAAAGAAGATTGGAAACATAGGTTAGAAATGGG
AGGGGAATAGGGGAAAAGAAAATGAGGGATTAAGAATGTTAGGAGTAAGAGCGGAGAGTT
AAGAGAGAGGA
GenBank Accession CR934792 [GenBank]
Graphic View Graphic view of gene At3g06365
Predicted Position of Insertion Chr3:14202962 - go to primer design
BLAST e Value 8e-51
Hit Clone Code (BAC ID) F21A14
Hit Gene Code At3g06365 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation novel transcribed region
Insertion Classification TS2TE
Confirmation Status unknown

Gene hit At5g11720

 
Sequence (A. th genome BLAST matches underlined) 
>61-K013073-022-150-E08-8409
NTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGACGTT
AGGTCAAGACACTAAAACCTATGAGATTGATTCCCAGTTCTTGATTGGTAAAAGCATAAT
GGTTTCTCCAGCGCTGAAGCAAGGGGCGGTAGCAGTGGATGCATATTTCCCTGCTGGAAA
TTGGTTCGATCTTTTTAACTATTCCTTTGCCGTTGGTGGAGATTCTGGCAAGCACGTTAG
ACTTGATACTCCCGCTGATCACGTCAACGTTCATGTTCGAGAAGGTAAATAGTATATTCT
TTGATAGCCAGTTTTTAATAGCCAGAGTTGAGCTTGAACCGCGTGATTTTGGTTTAACAT
TGTGAATAGGTAGCATTGTGGCTATGCAAGGAGAGGCATTGACGACTATGGGATCCTCCC
TATCGTGAGTCTTTTTACTCAGGGATCCTCCCTATAGTGAGTCGTATT
GenBank Accession AL757577 [GenBank]
Graphic View Graphic view of gene At5g11720
Predicted Position of Insertion Chr5:3779245 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T22P22
Hit Gene Code At5g11720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Glycosyl hydrolases family 31 protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37