SimpleSearch - Line and FST details


Line specific information

 
Line ID 161D12
Vector Used pAC161
Line Availability available as T3 set from NASC (N415408)
Segregation Analysis 100:85:78
Confirmed for Hit At4g38380
Parent of DUPLO pair 12033
Parent of pair(s) none

Gene hit At4g38380

 
Sequence (A. th genome BLAST matches underlined) 
>92-K013272-022-161-D12-8409
CTGATCCATGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATGCATGATCTA
CTTACTATGCGACTACGGATCTATTAGGTTGGCCAGCAATGGCTGGAAGAGAGAGCATCA
CGAGTTCTCGTTTGATATCGACAGGACGTGCTACACCAGTGTGAACCCCATTAACCTCCC
TATGGGATCCTCCCTATAGTGANNNNNNNNNNNNNNNNNNNNNNNN
GenBank Accession BX546558 [GenBank]
Graphic View Graphic view of gene At4g38380
Predicted Position of Insertion Chr4:17974299 - go to primer design
BLAST e Value 7e-46
Hit Clone Code (BAC ID) F22I13
Hit Gene Code At4g38380 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MATE efflux family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX546557 [GenBank]


Last Updated on 10.06.2021 13:37