SimpleSearch - Line and FST details


Line specific information

 
Line ID 163C01
Vector Used pAC161
Line Availability available as T3 set from NASC (N415577)
Segregation Analysis 50:18:18
Confirmed for Hit At1g21380
Parent of DUPLO pair 603
Parent of pair(s) none
Note

Gene hit At1g21380

 
Sequence (A. th genome BLAST matches underlined) 
>03-K013269-022-163-C01-8409
NTTTGATCCATTGTAGATTTCCCGTACATGAANGCCTTTACAATTGAATATATCTCGGAA
TGTTCTGCAGCAGTGCTTAAGTACAGATAGCGCCTATCTCCCCGATCTAGACTTTATCCT
ACTTCACATATGTACCAGAGCTCCACATCCTGACCACACATAGGTATACAGGAAGTCTTA
CCATACGTGCTCTGGTGCTGCATGGACCCTACATGACCCACGCTCACCGGCTCCTGATTA
ATGATCATGGCTCCGCCGGCCGGAAGGGCCTAACGCCTATCTGGTCCTGCTGCTGTGTCC
GGCTTCGTACGATGTACTTATTGTTGACGGGGAGCTATCGTGTCCTACTATNCAAGAACG
TGTAATGGCTCTTGTGAATACTACTTCGTAAGGATTTGTTTGTTTTCTCCCTCATCCCCC
TGTTGTCTCCTCCATTTTATAGATTTTGTTAATACTGAGAGAGATGCTCCTTCCTTTTTC
CAGAGATGAGGAACTTATGTGTCAAGGGGTGGCACTGAATGACAATCTGCAGCGCGTTCT
TCANCACCATGATGATAAGGCAAAGGGAAACTCTGGTCCTGCAACAACTCCCACTCCCAT
ACCGGCTGGTAGCATCA
GenBank Accession AL758857 [GenBank]
Graphic View Graphic view of gene At1g21380
Predicted Position of Insertion Chr1:7487109 - go to primer design
BLAST e Value 4e-124
Hit Clone Code (BAC ID) F24J8
Hit Gene Code At1g21380 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Target of Myb protein 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g12410

 
Sequence (A. th genome BLAST matches underlined) 
>03-K013274-022-163-C01-8409
TACGTTGTACTTCCATTACTCGCCAGTCAACATACGCCTTACTTCCCCCACATTGGGATC
CTCCCTATAGGAAGCTCCCTATAGGGACTGCTTAAACTGCTGATATGGCGACTATATGTT
GAATTTTCCAGGGAAGTCACTACCTTTACATCTTACACCGCAGTTTAAAATGTATGTAGA
AATCAGATAATCGGAGGAATAAAAAAACAATATTCAGTGATTTTATTACGTAACAATCAC
AATAACATAGACATTAAAACTTTTGACATAACAAACAAACAAAAAGACTAGCCTATGGGA
TCCTCCCTATAGTGAG
GenBank Accession AL758858 [GenBank]
Graphic View Graphic view of gene At1g12410
Predicted Position of Insertion Chr1:4225235 - go to primer design
BLAST e Value 4e-72
Hit Clone Code (BAC ID) F5O11
Hit Gene Code At1g12410 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation CLP protease proteolytic subunit 2
Insertion Classification TS2TE (3')
Confirmation Status failed, line belongs to a contamination group, please check line 163B02


Last Updated on 10.06.2021 13:37