SimpleSearch - Line and FST details


Line specific information

 
Line ID 164D12
Vector Used pAC161
Line Availability available as T3 set from NASC (N415696)
Segregation Analysis 101:98:90
Confirmed for Hit At5g20490 At4g00940
Parent of DUPLO pair none
Parent of pair(s) 83585, 83593, 83598, 83603, 83607, 83611, 83615, 83618, 83620, 83621, 83623

Gene hit At5g20490

 
Sequence (A. th genome BLAST matches underlined) 
>92-K013270-022-164-D12-8409
CTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATATCCGGCTGCG
TCATGAACATGTGGACTGAATGCCTCCGATTAGGAGATGGACATAACACAGTGACTGCTC
TTCTAGTAGACAGCCTGCTCACTGAGATGACCGTCATGCCCTTGATCGTCGCTGGCCTCG
CCTAGGGGACGATAAGGATAGGCTGACGTCACTCTATGTCGATAAGGAGCGTTGTGCTAT
CGCATCCTCCCTATAAAGACTGACGACGGAGCAGCATTCCAAAAAGATCCCTTGGCTCGT
CTGGGTCGGCTATGGGATCCTCCCTATTAGTGAACNAACAAANNNANNANAAATATGNNC
ATTANTCTCTTAATAACGTGAAGTGGATTGGTTGGTTTAATACATCTTTTATTACAGGCT
TCGCTTCAGGCTGAACGACAAGCCGCAGAAAATTTGAGAAAAGCTTTCTCTGACGCAGAA
GCTATGGGATCCTCCCTATAGTGAN
GenBank Accession FR804824 [GenBank]
Graphic View Graphic view of gene At5g20490
Predicted Position of Insertion Chr5:6930682 - go to primer design
BLAST e Value 8e-61
Hit Clone Code (BAC ID) F7C8
Hit Gene Code At5g20490 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation myosin family protein with Dil
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g00940

 
Sequence (A. th genome BLAST matches underlined) 
>92-K013275-022-164-D12-8409
GTGATCCATGTAGATTNTCCCGGACATGAAGCACTTTACAATTGAATATATCCTATCAAG
AGTATGATCATGAGCACCCCAAAAAGAATCTTGGGTTTTCATTAGACAGGAACGAGGAAG
AGATTGGTAATCATGATAACTTCGTTGTTAATGAGGAAGGAAGTAAGATGATGTATCCTT
ATGGAGATCATGAAGACCGTCAACAACATCACCATGTGAGACACGATGATGGTAATAAGA
AGAGAGAAGGTGGTTCAAGCAATGAGCTATGGAGCGGAATCATCCTATGGGATCCTCCCT
ATTAGTG
GenBank Accession BX572201 [GenBank]
Graphic View Graphic view of gene At4g00940
Predicted Position of Insertion Chr4:403581 - go to primer design
BLAST e Value 3e-128
Hit Clone Code (BAC ID) T18A10
Hit Gene Code At4g00940 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Dof-type zinc finger DNA-binding family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37