SimpleSearch - Line and FST details


Line specific information

 
Line ID 164G11
Vector Used pAC161
Line Availability available as T3 set from NASC (N415731)
Segregation Analysis 50:24:20
Confirmed for Hit At1g18370
Parent of DUPLO pair 2672
Parent of pair(s) none

Gene hit At1g18370

 
Sequence (A. th genome BLAST matches underlined) 
>87-K013275-022-164-G11-8409
NTGATCCCGTGTAGAATTCCCCGGACATGAAGCCCTTTACAATTTGAATATATCCTGCAT
TTGACGTCTTAAGAACTGCATTTGACGTCTAAAACATTGACTCTGACCAAAGCAGGGCTT
ACCTTAATTATGTGATTGGAAATATCTTTGACAGGCTTTCTCCGTTACTCCTCTCATGGT
ATATGCCTTTCCACTGCCTATGGGATCCTCCCTATAG
GenBank Accession AL759006 [GenBank]
Graphic View Graphic view of gene At1g18370
Predicted Position of Insertion Chr1:6323162 - go to primer design
BLAST e Value 3e-51
Hit Clone Code (BAC ID) F15H18
Hit Gene Code At1g18370 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ATP binding microtubule motor family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g11070

 
Sequence (A. th genome BLAST matches underlined) 
>87-K013270-022-164-G11-8409
NTGATCCATCGTAGATTTCCCGTACATGAAGCACTTTACAATTGAATATATCCTGCATTC
TGAGCAGTCAGGAAGAACTGTCATTTGACGTAAATAACAGTTGACTCTGACCCAGCAATG
CTAACCTTACTTATGTGAGTGTGAATAGTCATTGATCAGCTTTCTCCGTTACTCCTCTCA
TGGTATATGTCTATGGGATCCTCCCTATAGTGATGGCAAACAGAGACGCTGCACCGCTTG
CATTCTCACATTTGTATGAAGACGGGACGCCCAGATTGAAAAGCCTACATGGACTCTACT
CGGTGGACTCAGCACCGATTTTGGCCTGATCGGCTGCTTCGCCAATGATTCTGATCGGTC
ATTTGATGCTCTAGTACTCCGCGGACTAACCTTTATCTTCATTCCCACATTGCCGTTCTC
TGCCGCATTAAGCCTTTCGTCCATCCCCTTAATCAGCCCCATCTATGCAGNTATGGGATC
CTCCCTATAGTGA
GenBank Accession AL759005 [GenBank]
Graphic View Graphic view of gene At1g11070
Predicted Position of Insertion Chr1:3692008 - go to primer design
BLAST e Value 4e-72
Hit Clone Code (BAC ID) T19D16
Hit Gene Code At1g11070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hydroxyproline-rich glycoprotein family protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37