SimpleSearch - Line and FST details
Line specific information
| Line ID | 203G10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N419474) |
| Segregation Analysis | 100:67:63 |
| Confirmed for Hit | T5P19 At3g56400 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit F2A19
| Sequence (A. th genome BLAST matches underlined) | >79-K014506-022-203-G10-8409 TTGATCCATGTAGATTNTCCCGGACCATGAAGCACTATACTCAGTGGACCTGTCCTTTAC CTAATACACTCACTCTACAAATTCAAAATTAAAAATCAACGCAAATTATCTCAAGTGTAT TATTTTTAGTTTTTCGTCATGTGCACTAACTACATTTAACGTGTAAAGCTATATACTGAT CTCAGCTCCATATGCATTACTTTCTTTCTTCTTTCGATCATATGCCCTTACCCTTTATGG TTTATATAGCTATGGGATCCTCCCTTAGGTGAG |
| GenBank Accession | AL760906 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:22791252 - go to primer design |
| BLAST e Value | 4e-112 |
| Hit Clone Code (BAC ID) | F2A19 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit T5P19
| Sequence (A. th genome BLAST matches underlined) | >34-K105033-0022-203-G10C-3144 CCTTGCAGACCCTTCCTCTATATAAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCC GGGGATCAGATTGTCGTTTCCCGCCTTCGGTTTAAACTATCAGTGTTTGGATATCAAAAT TATCTTCATAGAAAAACGGATCATATCATTTGGATATCAAATTTAACTCGAGATTTCAAA TAAATAATTCACTATTCCAACTGATCTTACTACATCAGTAAAAAAAAATTGGTAGTACAA TCTCGAGGAACAAAAAAGTTTACAAATGAAATTTAGAATCTTGTTTAATCTTTAAATGGA TAGTTTTTCATAACTCTTTTAATTAGTCTAGTTTTTGATACAAATTTTATCCGGTTATAG AAAACATTAAAGGACCCTAAGTTTGGATTTCAGCAAAATTATATATATTCCATTCTCACT TAGGGATGAAATGACATCATTCATCACTACGTCATTTGAGCTTACGTCAAGCTCACCATA AGCAAAAGAAATGGGTGGATAAGTTCAAGTTCCATCTCATTTCCTCACACATCTCTCTTT CTTCCTTCTCATTTCCTCGCATCTTCCTCTAAAAAAAAAAATCAAAGAAACCAACAAAAT AAAAAGTGCCCATCATTACAAATCTTATTTCCACCTTATATTTACACACACTTCTCTTCT TTCCTTTAATCATACAAACCACCCCAAGAGGAAAGAAAAATAAGATACCACTCACCAAAA ACTTCCTCAAAACTAACAAATGGATACTAATAAAGCAAAAAAGCTTAAAGTTATGAACCA ACTCGTTGAAGGCCATGACTTAACAACTCAGCTTCAGCAACTCCTCTCTCAACCCGGGTC CGGTCTAGAGGATCTAGTGG |
| GenBank Accession | LN713401 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:20911035 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T5P19 |
| Insertion Classification | Genome Hit |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g56400
| Sequence (A. th genome BLAST matches underlined) | >79-K014507-022-203-G10-8409 TGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGTTCACTTCGGACCTTGG GAATTTGGCATTAAGAATCTCCTTTTGTCCATATTTCCTCCAAGAAAATGCGTCCTCAAG TATAGTCGACTCTATAGTACACGTCTCCGATCTCTTTCTGCTCATAATATTAATGAAATC AATTAATCATTTGGCTACTTATGATTCTTGCAACCAAAGCTAAATGTCTTGTTTGTTTGT GACTAACCATAACAGTAAGTAAATCCTATGGGATCCTCCCTTAGGTGAG |
| GenBank Accession | BX572218 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr3:20909730 - go to primer design |
| BLAST e Value | 3e-119 |
| Hit Clone Code (BAC ID) | T5P19 |
| Hit Gene Code | At3g56400 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | WRKY DNA-binding protein 70 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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