SimpleSearch - Line and FST details
Line specific information
| Line ID | 236E05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N422613) |
| Segregation Analysis | 50:20:18 |
| Confirmed for Hit | At4g31900 |
| Parent of DUPLO pair | 2706 |
| Parent of pair(s) | none |
Gene hit At4g31900
| Sequence (A. th genome BLAST matches underlined) | >37-K014339-022-236-E05-8409 CTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAAAGCAATACTACCCTGCCTA CACTATTGAGAGCAGGAGAATATGAAGAACGCGTGGCGACCACCTTGCGAGCTATGATTC GTGATTTACCAAATCGAACTTACGTGCGATCTACCTGTATACTGTTGGAAACTTTTGTAG GAGACGATGTGCATCTTGGATGCCTTCTCTAACTACTGCTCGGGCACCCTAAGAATTGAC ATTAATAATCAAGTGATGATAAGATAACCAGACAAGAGAAGCAACAAAAACATAATAATC GACATGTTTAATTAAATACAACACGATATCGCATATTGCTGGGAATTTACCAAGAGCAGT GCAAGTACGATAACCCCTTCCACTTCACAAGATATTGTTTCACGACAGCTATGGGATCCT CC |
| GenBank Accession | AL938629 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:15432163 - go to primer design |
| BLAST e Value | 6e-108 |
| Hit Clone Code (BAC ID) | F11C18 |
| Hit Gene Code | At4g31900 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | chromatin remodeling factor |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g06365
| Sequence (A. th genome BLAST matches underlined) | >37-K014335-022-236-E05-8409 CTCTGATCCATGTAGATTTCCCGGACATGAANGCCTTTACAAGCAGCACGACACGGCCTA CCATGNTGATTTTGAGAATATGTAGGGGCCGTGGCGCCCCCAATGCCTCTAATCATTGGC TTTACCCGATAGAACTCGCGTGCGAGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAAC CAGCTACTATGGGATCCTCCCTATAACGAGTGCTCGGGCACCCTAACAATTGACATTAAT AATCAAGTGATGATATTATTTTTCAACAAGAGAGGCACCAAAGACATAATCATCGAGAGG GGGGGTGAAATACAACCCGCCCCCGCATATTGCTGGGAATTTACCAAGAGCAGTGCAAGC TCGATAACTAACTAACAAAAAACAACA |
| GenBank Accession | AL938628 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:14201175 - go to primer design |
| BLAST e Value | 2e-46 |
| Hit Clone Code (BAC ID) | F21A14 |
| Hit Gene Code | At3g06365 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | novel transcribed region |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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