SimpleSearch - Line and FST details


Line specific information

 
Line ID 245D11
Vector Used pAC161
Line Availability available as T3 set from NASC (N423471)
Segregation Analysis 50:11:4
Confirmed for Hit At1g11160
Parent of DUPLO pair 11906
Parent of pair(s) none

Gene hit At1g11160

 
Sequence (A. th genome BLAST matches underlined) 
>84-K014391-022-245-D11-8409
NTGATCCATGTGGAATTTCCCGGACATGAAGCACTTTACAATTGAATATTTCCCGGGAAA
ATCGTCTTTTTTCTCTATTAGTAATACTGACTTACATGTGTGACCGGGTCCAATGTACAC
GGTTTGGGCTGCCAACTGTACGGGTGTCGGGTTCCAATGTAGCGGCTGTGGGTTGCCAAT
GTACGTGCTATCCACAGGAAAAAAACATTAACCACCTTCCTCCCCTGCTATTGGGAGACT
CTACTTAGTGAGAGAGNNNCNNNTCCTTNTAACAGGTGGAGATGATTATAAGGTCAACCT
TTGGTCAATCGGCAAAACCACTTCTCCAATGGTCTCTTTCACATTTCTCTCTTTTTTTAA
TTTGTTCATTCTCGCTGGTCTTCATTTGCAATTTCTTATCTGGGTTCAAGATTTGCCACT
TATAGCTATAACTACAGTTATTTCAGCTAATGTGTATGAAAATGTCAAAATTGTGGTCCC
TCTTGGTATAAAGCATGTAACATCTTGTGCCTCTTCATAGAAGAGCGATGATATTTTATT
TTATGGGTTGGCGGCAGAAGCTCTGCGGGCATACAAGCCCGGGCGATGCAGAACATTGAA
ACGAGTAGAAGCTATGGCGCCCCGCGGCGGGACCCGAGGGGGCGCCAGAGGCGGAGGAGA
TAGGCGG
GenBank Accession AL940216 [GenBank]
Graphic View Graphic view of gene At1g11160
Predicted Position of Insertion Chr1:3733860 - go to primer design
BLAST e Value 1e-139
Hit Clone Code (BAC ID) T28P6
Hit Gene Code At1g11160 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Transducin/WD40 repeat-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37