SimpleSearch - Line and FST details


Line specific information

 
Line ID 247H11
Vector Used pAC161
Line Availability available as T3 set from NASC (N423711)
Segregation Analysis 50:40:39
Confirmed for Hit At3g12070
Parent of DUPLO pair 12645
Parent of pair(s) none

Gene hit At3g12070

 
Sequence (A. th genome BLAST matches underlined) 
>88-K014442-022-247-H11-8409
TTTGATCCATGTAGACTTTCCCGGGACATGAAGCCTTTACTCATTTACTAATTGGAGCCG
TGCATGATACTATGGGATCTCTCCCTATAGTGAGAAGTCGTCCATTTAAACCTCCAGACT
CGTAGTCTTGTCTTTCACATAACCACCATCCAAGTAAGTCCTTATCAACACGATGGAGAT
TCCCGGTGATAGCAAGAGCACCCACACAACAGAAAACTGCAGCAACATAAAGAATCAATG
CCCTTTAATTACCATATGATGCTGCAATGATATTCAGTAAAGTCATCTATGGGATCCTCC
CTATAGTGAGANNNNNCCCCNCGTGCGGGTCTCAAACTCCGCCTGAGAAGGTATTGGTCT
CCGCGGCAGCGCGCGGATAGCGCCAGGAGAAGACCAACGGATACCCGCGCGCCTTGGCCT
CCGCTTACCAAAAAGAAACCCGCATTGGATACATCCATACCGTTTACCCACAAGCACGAT
CACTCCAAGCTTAAGCCCCCAATTTTACACCAGAGGCGGGTTCCGAGTACTGGTAAAAAG
AAGAAGGACGGGCGGCTCTGTGAAAAGAGCGTGCGGTGCTCACCACACCCGCGTTATTCC
CCAGTTGTGCCCCCCCCCCCGGGAAATCCCACGGGCCGCTGGATAAATCCGTGCGTCGGC
AACGAACCCGTGCTTCGCCCTCCCGCCGCAATGACCCCGCCGATACACCCTTCCTTCCTC
CTCCAGCACCAT
GenBank Accession AL940434 [GenBank]
Graphic View Graphic view of gene At3g12070
Predicted Position of Insertion Chr3:3845912 - go to primer design
BLAST e Value 6e-105
Hit Clone Code (BAC ID) MEC18
Hit Gene Code At3g12070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RAB geranylgeranyl transferase beta subunit 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37