SimpleSearch - Line and FST details


Line specific information

 
Line ID 250C04
Vector Used pAC161
Line Availability available as T3 set from NASC (N423932)
Segregation Analysis 50:38:31
Confirmed for Hit At5g05780
Parent of DUPLO pair 1804
Parent of pair(s) none

Gene hit At5g05780

 
Sequence (A. th genome BLAST matches underlined) 
>27-K014486-022-250-C04-8409
TTGATCCATGTAGATTTCCCGGACATGAAGCACTTTACANTTGAATATTTACAATTATGT
AGATTTATAATTTCTTTTTCTCCAACCTATGTGTTTTGCGCTCTTTAAAATATTCTATGG
GATCCTCCCTATAGTGAGAAGGGGCCTTACGATAGGGACTGCAACTGTTGAGGGCCACTG
TCGTAAGGGGGGAGATCGTTTAAAGGCGCTGGCTTGGAAGACGAGATTGGATCCTGAACT
CTGGCTACACAGCTTCTTGGTGCGGGGAGGCCCTCGTATGAGACGGCTGACCGCACAGGA
AAATCCGACGAAGGCCTTCGCTTTTTGGGGTCGATGGGATAAGAAGAAGAAAACTCGGGG
TGCCGCTAGCAAACAATCCTGCGCGGGATGGGGGCCCAACGCCTG
GenBank Accession AL940656 [GenBank]
Graphic View Graphic view of gene At5g05780
Predicted Position of Insertion Chr5:1737680 - go to primer design
BLAST e Value 4e-10
Hit Clone Code (BAC ID) MJJ3
Hit Gene Code At5g05780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RP non-ATPase subunit 8A
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL940657 [GenBank]


Last Updated on 10.06.2021 13:37