SimpleSearch - Line and FST details


Line specific information

 
Line ID 256H07
Vector Used pAC161
Line Availability available as T3 set from NASC (N424571)
Segregation Analysis 50:27:27
Confirmed for Hit At3g07390 At1g55520
Parent of DUPLO pair 2374
Parent of pair(s) none

Gene hit At3g07390

 
Sequence (A. th genome BLAST matches underlined) 
>56-K014920-022-256-H07-8409
CACCAAACCACACCAGAACAGAACTCAGCCATGGCTTCTTCTTCTTCTTCTCTTCTAATC
CTATGGGATCCTCC
GenBank Accession AL941369 [GenBank]
Graphic View Graphic view of gene At3g07390
Predicted Position of Insertion Chr3:2365416 - go to primer design
BLAST e Value 4e-10
Hit Clone Code (BAC ID) F21O3
Hit Gene Code At3g07390 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation auxin-induced in root cultures-like protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g55520

 
Sequence (A. th genome BLAST matches underlined) 
>56-K014917-022-256-H07-8409
ACAAGATCTTACCTATTTTCTTTTTTGGTTTGATTCACAAATATTGCCTCAACAGTGAAC
TTAGACTGCAAGCTTGATCTTAAAGCCATAGCTTTGCAAGCTATGGGATCCTCCCTATAG
TGAGATTGATAGGCCATTGTATACATAAAAGTAACGAGGACACACACACAAGCATTTTGA
AAGTGCGCTTAAATTTGGCAAAACACAGACTCATGTGTATCCAATCCAACCACCGTCTCC
GAAACAAAATCGTCCTATAGCTTTACAATTTCATTGACCAAATCTGGTTATCTAAAAACC
AGTTTTGATAATTGAAATCTATGGGATCCTCC
GenBank Accession AL941368 [GenBank]
Graphic View Graphic view of gene At1g55520
Predicted Position of Insertion Chr1:20727348 - go to primer design
BLAST e Value 2e-39
Hit Clone Code (BAC ID) T5A14
Hit Gene Code At1g55520 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation TATA binding protein 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37