SimpleSearch - Line and FST details


Line specific information

 
Line ID 278A03
Vector Used pAC161
Line Availability available as T3 set from NASC (N426595)
Segregation Analysis 50:49:36
Confirmed for Hit At3g07720
Parent of DUPLO pair none
Parent of pair(s) 2637
Note

Gene hit At3g07720

 
Sequence (A. th genome BLAST matches underlined) 
>17-K015156-022-278-A03-8409
TTTCCCGGACCTTGGCAGCGACTCCACTGGAAGGCAAATGGGTTCAGGTCAGCTTTCTCG
CCTTTGTGTTTCTCTTAGAGACGAATCTCGTTTCACTCGGATACTTACTTGTCTCACTGT
TTTCGGATTTTTATTGAATCGTACGAGACTTTCGGCTTTTGAAATTCTAATTTCGTTTTG
GAATCTGTTTATTATTCTCTGTAAATCTGTCCAAGTTCTCTGTTAGATTGCTGATGTGAT
TATACACTTAGGTTCAATAATCATTTTGGTTCTACAACGAATCTCCTATGGGATCCTCCC
GenBank Accession AL943918 [GenBank]
Graphic View Graphic view of gene At3g07720
Predicted Position of Insertion Chr3:2465440 - go to primer design
BLAST e Value 8e-138
Hit Clone Code (BAC ID) MLP3
Hit Gene Code At3g07720 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Galactose oxidase/kelch repeat superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g48430

 
Sequence (A. th genome BLAST matches underlined) 
>17-K015122-022-278-A03-8409
NTGATCCATGGTAGATTTCCCGGACCTGAACGCCTTTACATGTGAAAGACTAGGGATATC
CCTAGGAGGGAAAATTGCTCTCATTAGCTGCTCTCATTACACGCACTTGCTATGGGAACC
AATATATGTCTAACGTTACTATGTTGTATATAGAATATGCACAGAAAATACGGCCTACTG
CAACCATCCTATGGTATCTTAACTCTGGACCCATACTATGTGATGTAAGCCCGACCTGTA
TGCGCACAGACTGATGGGGCAACACCCATGGGTCCAACCATTTCAGATGCATGTCTTGCT
TCTGCTGCAACTTCTGCTATGGGATCCTCC
GenBank Accession AL943917 [GenBank]
Graphic View Graphic view of gene At1g48430
Predicted Position of Insertion Chr1:17905139 - go to primer design
BLAST e Value 3e-26
Hit Clone Code (BAC ID) T1N15
Hit Gene Code At1g48430 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Dihydroxyacetone kinase
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 278C01


Last Updated on 10.06.2021 13:37