SimpleSearch - Line and FST details


Line specific information

 
Line ID 282H01
Vector Used pAC161
Line Availability available as T3 set from NASC (N427061)
Segregation Analysis 50:46:36
Confirmed for Hit At5g42540
Parent of DUPLO pair 2353
Parent of pair(s) none

Gene hit At5g42540

 
Sequence (A. th genome BLAST matches underlined) 
>08-K015202-022-282-H01-8409
TGCTGATTCCATGTAGATTTCCCGGACCATGAAGCATTTACAATTGAATATATTCGATCG
AACCATCAAATCGTAACGGTCTGGATCAGATACATGATAATCCTATGGGATCCTCCCTAT
CAGTAGAGGCAACTCACAACATCTCTGCGTATTTGTTCCATTTCCTCCACAGACTTAGCT
GCGAATTTCTCTTCGTAATATCTCTCTCTCCATCCTACTTTATTTAGCTTAACCTGATAA
TACAACAGCCATGTGAGCTTGCCAGCGTGATTAAATGATTGATTAAACAGAAATCAAACA
AACTTATGAAGATTACACACTCATGAAATCATTGATGAACACACAGCTGAAAAAATAGAA
ATATGACCTTATCTTGTTCTCCATTTCCTGACCTGAACCCATCACCTTTATCCCGCAGTA
GTTTCTTAAGCTTAAACTTTAAGTCTTCTTCGTTACCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL944529 [GenBank]
Graphic View Graphic view of gene At5g42540
Predicted Position of Insertion Chr5:17011795 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MDH9
Hit Gene Code At5g42540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation exoribonuclease 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL944528 [GenBank]


Last Updated on 10.06.2021 13:37