SimpleSearch - Line and FST details
Line specific information
| Line ID | 286G01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N427433) |
| Segregation Analysis | 50:48:43 |
| Confirmed for Hit | At1g68600 At3g24620 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 4037, 4083, 4211, 9934 |
Gene hit At1g68600
| Sequence (A. th genome BLAST matches underlined) | >07-K015494-022-286-G01-8409 NTTTTGATCCATGTAGACTTTCCCGGACATGAAGCACTATCGTTTACATTTGATACTCTT TCCCTTATTAACATGCATACTGTAAATGCACCAGATCGGAAGTTTTATATACCACTTGAT TATTTATAGATGATGAATCAACTGCATGCATTACTTGCGTTGTCAACACTAATCTTGATA AATATATAAACAAGCCTCATTCGATTCCTAAGGACGACCATAGCCTCTCAGGGACTGCTG AACTGCGCCAGATTCTTTTCTAATGGTACGTCCAATGGGATCAGAACCGGGAGCAAACAC ATAGAATCTTCTCTGNCAGGCGAGCGACGTCACTGATAGCCGTGACTCCAAGTTCCGGTG TCGCTCGTGGACGGCTCTCTACGAGGCTCCGGCGAAGTTGCACGCGCTGGGACATTCTGA ACGTCGGAAACTTTACTTCTCCATCAAGATGGGAATTGCTTTGGCACTCTGTCCTTTCGT CATCCTTGTCAAAGAGCCGCTTCACGATGGTATGGGATC |
| GenBank Accession | AL945062 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:25759744 - go to primer design |
| BLAST e Value | 7e-95 |
| Hit Clone Code (BAC ID) | F24J5 |
| Hit Gene Code | At1g68600 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | aluminum activated malate transporter family protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g24620
| Sequence (A. th genome BLAST matches underlined) | >07-K015496-022-286-G01-8409 ACATTGTCGAGTTTGTTCCTTCTCACATACAGGCAAAGATGGAGTTCTGCACTGAGGTTT GAGTTTCCCAAAGAAAAGAAAATATCATTTTTGCGACCTCTTTACAATAAGTTACAATGT TAACCATTTTTTTGTAGATTATGGTGACAAGACAAAGAGGTGATCTTCTTATGAACATTC CAGCTCTTCGAAAACTTGACGCCATGCTCATCGTAAGTCTCTGCATTCAATCTGTATTGA ATCCGGGTTATATCTAGCGGATCTTCCCTTGGGAGAGCGTTTTGGGTTTTAAGGGCATCA TCTAGAATGACGATTTCATCCTAATGGCTATAACTATGGGATTCTCGAAATAGGATCAAT CTCCGTCGCATTTTGTTGCGCAGATATACAAAGTGGCCGATGCCGATGCGTATTGCTATC AGATCCGTGTAATTGCCCCTTATATGTGCATGCGCACATTTCCGATTCCACAGGATATCG CTTCCTTCTGTTTCCTCTGGATAATCAAATGGCACACTGGATCCTCCCGAATGCCTTAGC ATCCTACAGAACAATATAGTCTCCGAAAAGGAGAGAGGATGAGCTCATCCTATTTACGAG TAATATTCCTCTTAAGTGCCCTTTAATGTCGCCGGTTCTTTATTCATAACCAATTCTTTA ATAACCCAATCCGCACCCCTCGGGCGAGGGGTTCCGAATCTGCAAAAAATTGGGGTCCGG GAATGGGACCACCAATCCCTTGGAATTCCTGGTTCCAACCCCACCCGGGTCCGGGCCCGA AAGATCNAACCCCCCTTGGATAGGGAAACCCCCACATCCAAAACTACCGCCCAGGGTGGG GCCTATACAAGAAAGGGGAAAAGG |
| GenBank Accession | AL945063 [GenBank] |
| Graphic View |
|
| Predicted Position of Insertion | Chr3:8982153 - go to primer design |
| BLAST e Value | 6e-111 |
| Hit Clone Code (BAC ID) | MOB24 |
| Hit Gene Code | At3g24620 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | RHO guanyl-nucleotide exchange factor 8 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
