SimpleSearch - Line and FST details


Line specific information

 
Line ID 286G04
Vector Used pAC161
Line Availability available as T3 set from NASC (N427436)
Segregation Analysis 50:50:46
Confirmed for Hit At1g30330
Parent of DUPLO pair 11870
Parent of pair(s) none

Gene hit At3g06365

 
Sequence (A. th genome BLAST matches underlined) 
>31-K015496-022-286-G04-8409
TGTAGCATTTCCTGGACAGTGAAGCCTTTACAATTGATTCTTTGTGAAGCAGAATTACCA
AGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGAC
AGGTTAGTTTTACCCTACTGATGCCCGCGTCGCGATAGTAATTCAACCTATGGGATCCTC
CCTATAGTGAG
GenBank Accession AL945069 [GenBank]
Graphic View Graphic view of gene At3g06365
Predicted Position of Insertion Chr3:14202996 - go to primer design
BLAST e Value 1e-62
Hit Clone Code (BAC ID) F21A14
Hit Gene Code At3g06365 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation novel transcribed region
Insertion Classification TS2TE
Confirmation Status unknown

Gene hit At1g30330

 
Sequence (A. th genome BLAST matches underlined) 
>31-K015494-022-286-G04-8409
TTGATCCATGTATGATTTCCCGGCACATGAAGCCTTTACAATTGAATATATACCGATCAG
GATAAAGCGACTGGGGATGACTGACGAGCCTGCCTGCCTGAAGACGCTGCGGCCGACACT
ATGGCATCATCACCTGTAGGAAACTTTACTCACACCTATATGGGAGGCATTCCTTCGGTG
AGGCTGAACCTTATTTGCTGGGTTAGAATGCTCCACGAGCATAGAGATCCTTACCTTCCC
GCGGAATTCCGTGTCCCATGTCGACAGCCTACAAACTATTTCTGAAAAACTCTGACTGCT
ATGGTATCCTCCTGNNGACGAGAACCTGTTCACTGTGACCTTGAGGAAAATACACAACTC
TGCTTCCAACAGGAGGTAGTGAGACAAGAGGACCAGCACAAGCATGCCAGAGCTCAGAAT
TAAGAACTCTTTTCTCTCCTGTAACTTTCAATCCAAAACTCACAAAGTTAGTTTAAAATC
ACTATTTGCTATGGGATCCTC
GenBank Accession AL945068 [GenBank]
Graphic View Graphic view of gene At1g30330
Predicted Position of Insertion Chr1:10689522 - go to primer design
BLAST e Value 1e-90
Hit Clone Code (BAC ID) T4K22
Hit Gene Code At1g30330 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation auxin response factor 6
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37