SimpleSearch - Line and FST details


Line specific information

 
Line ID 291A12
Vector Used pAC161
Line Availability available as T3 set from NASC (N427852)
Segregation Analysis 50:50:43
Confirmed for Hit At5g62910 At1g68110
Parent of DUPLO pair none
Parent of pair(s) 519

Gene hit At5g62910

 
Sequence (A. th genome BLAST matches underlined) 
>89-K015349-022-291-A12-8409
NTTTTGATCCATGTAGACTTTCCCTGGACATGAAGCCTTTATAATTTAATCGTTGTTTTC
GTTCGATGCTAAATGACTAAAGTACCCTCAACGTACGTGTGGGTTCTTCTGTAAGTCGGT
GAGTGTGCACGTGTGAGGTAAACGATGTCGTATTTTTGAGTCTAACTATGGCAAAAGAGA
TATACTTTTACCTTTTTTTTTTTGGGTCCGAAAAAAATTTTTGAGAATATTTTTGGGGAG
TTCCCTTATTGGCAATTGGCAAACTGGAAATCTGGGGAGGGAAACCGGGGAAAGGATTTT
TTTTTTTTTTTCAACCAAAAATTTTTTTATGTACCCCAAAAAAAAAATCCTAGGGTTTGG
TGGGTTTTTGGTAAGGGGCATAAAGTTTTTTAATAACAATTTTTTTTTTTGGGAATTAAG
GGCGGGTAAGTTTTTATGGATTGGTAAAGCTCCTGGAATATTTAAATGGGGTGGATTATT
AAAACCTTCCACCAACCCATTCCGGTGGAAAAAAAGGGTGGCAAAAGCTTGGGGACCCT
GenBank Accession AL945669 [GenBank]
Graphic View Graphic view of gene At5g62910
Predicted Position of Insertion Chr5:25250558 - go to primer design
BLAST e Value 6e-71
Hit Clone Code (BAC ID) MQB2
Hit Gene Code At5g62910 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g68110

 
Sequence (A. th genome BLAST matches underlined) 
>89-K015354-022-291-A12-8409
TTTTGATCCATGTAGCATTTCCCGGACATGAANGCCTTTACAATTGAATTGTCTCTGATA
CNTTTCATATGTCAAATGCTGTGAGATTATGATCTTACTGAGCGTATACCCCGGTACTGG
CGGATGGTGTAGGTGAGAAGATCTCTAAATCTAGACGTAACGTATTCACACTTGACTTTT
ATCCTTCTCCAGGGTAGAAGACAGATGAAGAGAACCGAGGAAGAAGCGAGAGAGAGAGAG
GAATAACAGATTAGGAGGGAGGCGGCTCGGACGATGAAGCTGTGGAAACGAGCTGCCGCC
GCAATCAAAGACCGGAAAAGCTCACTATGGGATCCTCCCTATAGTGAGC
GenBank Accession AL945670 [GenBank]
Graphic View Graphic view of gene At1g68110
Predicted Position of Insertion Chr1:25524686 - go to primer design
BLAST e Value 2e-42
Hit Clone Code (BAC ID) T23K23
Hit Gene Code At1g68110 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ENTH/ANTH/VHS superfamily protein
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37