SimpleSearch - Line and FST details


Line specific information

 
Line ID 295F02
Vector Used pAC161
Line Availability available as T3 set from NASC (N428286)
Segregation Analysis 50:43:40
Confirmed for Hit At3g04450
Parent of DUPLO pair 2782
Parent of pair(s) none

Gene hit At3g04450

 
Sequence (A. th genome BLAST matches underlined) 
>14-K015445-022-295-F02-8409
AACTNTGATCCATGTAGACTTTCTCGGACATGAAGCACTTTACAACTTGAATATATTCCT
AGATAGCCTTTATCGCCATTGAACATATCGAGGACGGTGTGTGACCTCATATGATCCCAG
TCCTCGATGAAACACACACAAGTGTTAGGAAAGTTATTGTGGTCTCTCTCTTCTATGACA
TACTCCCTTTGACGACACGTAGATCTATATTGGAAGGACTTGATGTTTACCTCCTACCCC
CGAAAGATGCCCAATATCAGCCTCCATGACACATGCCTCATACGTACCTCTCAGATTTCT
TTATCAAAACGACTGCATCGACTTTCCACTTTGGGAAAGGGACCGACTCCTCTACCTGGA
CACCGATGACGATGCCTCTATCCTGTCCTGCTCTTTATCAGGAACGGGCTCCTCGCTATA
GTATCCCCCCAATACACCAACCTAGAATACCTCACCCTCCCTAAAATACATCACCGGGCC
CGCCCCACGAACCCAGGCACCCCGTTCCCCAAAGAAACCACCCCCATAGCGCGGCCTGCG
GTGGGGCCTTTTGCCCCCAACCGCGTACAAAAAAAAGGAGAGTACCCTCCCACACCCCCG
GGAACAGCCCAACACGATTTCTTCCCCNGAGAAACCCCCTTTTTAGCCCCGACTTTGGGC
CCTTATATTCCCTCCAAAAAACCGCTTTTTTAGAATGCTTACCGGTTGTCGCCCCCGCGG
CGTCCCCCTTCGCAAAGTACCGGCCCCGCACCCCCCGGGGCGCCACCCTTATATCCTTCC
CACCTTGGCGAAGCGAAAATAATAAAA
GenBank Accession AL946311 [GenBank]
Graphic View Graphic view of gene At3g04450
Predicted Position of Insertion Chr3:1184475 - go to primer design
BLAST e Value 2e-12
Hit Clone Code (BAC ID) T27C4
Hit Gene Code At3g04450 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Homeodomain-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR807350 [GenBank]


Last Updated on 10.06.2021 13:37