SimpleSearch - Line and FST details


Line specific information

 
Line ID 308D07
Vector Used pAC161
Line Availability available as T3 set from NASC (N429515)
Segregation Analysis 50:47:40
Confirmed for Hit At1g49780
Parent of DUPLO pair 2610
Parent of pair(s) none

Gene hit At1g49780

 
Sequence (A. th genome BLAST matches underlined) 
>52-K015815-022-308-D07-8409
TGATATGTAGATTTCCCGGACATGAAGCCATTTACAATTGAATATAGCATTTACGCCTAC
ATATATGCCATCGCTAACCGCTCTAACGGCGTCGAACGGATTCCTACACCTAAACAACCG
GCGGATCCAATCTCCGTTAGGTCACTTCTCAGTCAAGCATCCGCAATTACCGGAACTCAC
GTCTCTGTTCGTTCACGCGCCGCCGCTATTCGTCGTTTGAGAGGATTACCTATGGGATCC
TCCCTATATGGAGAATAACCTAATCATTCACTATCACCTCCACTGTCGCTTAGAAATCAG
TCGCCCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL947924 [GenBank]
Graphic View Graphic view of gene At1g49780
Predicted Position of Insertion Chr1:18430057 - go to primer design
BLAST e Value 4e-84
Hit Clone Code (BAC ID) F14J22
Hit Gene Code At1g49780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation plant U-box 26
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL947924 [GenBank]


Last Updated on 10.06.2021 13:37