SimpleSearch - Line and FST details


Line specific information

 
Line ID 308F08
Vector Used pAC161
Line Availability available as T3 set from NASC (N429540)
Segregation Analysis 100:85:77
Confirmed for Hit At3g30775
Parent of DUPLO pair 2006
Parent of pair(s) none

Gene hit At3g30775

Sequence (A. th genome BLAST matches underlined)
>62-K015783-022-308-F08-8409
TGATCTGTAATTTCCCGGACATGAAGCCATTTACATTGAATATCCGGTACATTACAATAC
CAAACCGGATCAATCCGTGTCGCACAACAATAAACCGGTATTTTAGTAACCAGAGAATAT
TCCTAAAGTGTTTTCTCCCGAAAGTCCTATGGGATCCTCCCTATAGAGAGCTTTTTATTA
CCGGCAATGAACCCACTTGTCTCCACTCTATTGTAGCCCTTTCAGATAAAACCGTGCATT
CTATGGGATCATCCGCTATATCGAGACAGCTCATGGAAGGATTCAAGAAATCTGTACGAA
ATGCCAAGAGTCCAATGTACCATTGTTGATTGATGCGGAAGACACAATCCTCCAACCCGC
GATCGATTACATGGCTTATTCATCGGCGATCATGTTCAATGCTGACAAAGACCGACCAAT
CGTTTACAACACGATTCAGGCGTACTTGAGAGACGCCGGTGAGAGACTGCATTTGGCAGT
ACAAAATGCTGAGAAAGAGAATGTTCCTATGGGGTTCAAGTTGGTGAGAGGGGCTTACAT
GTCTATGGGATCTCCCCAATANTGAGGANANNNNNNNNNNNNNNNNNNNCCCCCNNTNNN
CGCGCTNACTGCCCGGAGGGGGCCCCACAATATATAGAAAACCGCGGAAAAGCGAAAAGA
ANGGAAACCAAAGCGGGCGGACCCCAGAGAACGGGGGAGGCAGAAAAACGACCGGCAAAA
TTAATCCCGGCCGCGCGCCCGCCTACATGTGCTCACGGGCGTAACGGAAAAAATTACCGA
AGATGATAGCCGTTAAATGCGTTTACGACAGTGGCCGATGTCGTCAGGCCGAACAACAAC
CATCGTGTGCGGACGGGCACATAACGACGTCACCAATCGCGGCAAGGAAGGGAAAAGAAG
AG
GenBank Accession AL947957 [GenBank]
Graphic View Graphic view of gene At3g30775
Predicted Position of Insertion Chr3:12449992 - go to primer design
BLAST e Value 6e-154
Hit Clone Code (BAC ID) MIF6
Hit Gene Code At3g30775 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Methylenetetrahydrofolate reductase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details